Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0814 ATGGGACGGTGTTTATCACGTAGTTTTGCTTTTCTACTTGTTTCTGCTCTCTGTGTCTTCAGCTGCTTTGTCGATGTTGCAGAAGCTCAAGCTGCAAACGCTACTACAGATCCTAATGAAGCAAGAGCTCTGAATTCAATCTTCAGCACGTGGGATATTGAGGCAGACACAACTCAATGGAATGTAAGCGGTGATGTATGCAGTGGAAGAGCCGTTGATCTCACTACTACCATTGATGACGGCACTTACAACCCATTCATCAAGTGCGATTGTTCCTATGACAATAGAACTACTTGTCACATCACAGCACTGAAGGTTTATGCATTAGACGTGGTTGGTGAAATTCCTGAAGAGCTATGGACTCTAACTTATCTCACCAATTTGAAACTTGACCAGAATTACCTGACAGGTTCTCTATCTCCAGCTATTGGGAATCTAACTCGAATGCAATACATGAGTTTCGGCATCAACAATTTATCAGGGAACCTTCCAAAGGAATTGGGAAATCTTACTGAGTTAAGATCATTGAGTTTTTCTTCAAACAACTTCTCTGGATCTCTTCCACCTGAACTTGGGAAACTGACAAAGTTAGAACAACTCTACTTTGATAGTTCAGGAAATAGTGGTCCAATTCCTTCCACTTTTGCAAGCCTGAAGAATTTGGCGATAGTTTGGGCTTCAGACACAGAACTCACGGGTAGAATCCCAGATTTCATTGGGAATTGGTCTAAGCTTCAAACCTTGAGGTTTCAGGGGAACTCCTTCATTGGCTCAATACCCTCATCATTTTCCAATTTGACATCTATGTCAGAATTGAGAATAAGTGGTTTATCTAATGGGAGCGCCTCACTGGAATTTGTAAGGAATATGAAATCTTTGATTATTTTAGAACTAAAGAATAACAATATTTCTGGTTCAATTCCATCCACCTTTGGAGAATTTCTCAATTTGACCCAATTGGATTTAAGCTTCAATAACATCACAGGACAAATACCAGGACCAATTTTCAATCTGAGCTTGCTCCAATACTTGTTTCTTGGAAATAACAAACTTAATGGCACTCTTCCTGGGCAGAAAAGTTCTTCTCTTCTGAATATAGACTTGTCATACAATGATCTATCAGGTAGCCTTCCCTCTTGGGTAAATCAACCAAATTTACAACTGAATTTAGTTGCCAACAACTTGACAATTGATAGTTCAAGTAGCAGTGGCTTGCCCACAGGACTCAACTGTCTCCAAAAAAATTTTCCTTGTAATAGTGGTGTTGGTAGATATTCTGACTTTTCAATAAAGTGTGGTGGTCCCCGAATTACCTCGGCAGATCAAACTATGTATGAAATGGACAATGCAACACTTGGTCCTGCTACATACTTTGTTACTGATACAGATAGATGGGCTGTTAGTAACATTGGATTATTTACTGGGAGCAATAATCCTGTATACAAAAGTTTTGTTTCTAATCAGTTCACTGGTACTGTGAACCCAGAGCTTTTCCAAACAGCAAGACTCTCTGCTTCATCATTACGATATTTTGGTCTGGGGCTGGAAAATGGTTTTTACAACATCACCCTCCAATTTGCAGAAACAGCTATTCTGGATACTCCCACATGGAAAAGCCTTGGGAGACGGGTCTTTGATATTTATATTCAGGGAACTCGTGTTCTCAAGGATTTTGATATACAAAAGGAAGCTGGGGGTTTCTCTTACAGAGCTGTGCAAAAGCAATTTAGGTTTGAAGTGTCAGAAAACTATCTTGAGATCCATCTCTTTTGGGCTGGAAAAGGGACTTGCTGTATACCAGCTCAGGGTACTTATGGGCCCTTGATTCAAGCCATCAGTGCTGTCGCAGACTTCATACCTTCAGTTAGTAACAATCCTCCAAGCAGTAAAAAGAATAGAACCGGTCTAATCATTGGAGTTGTTGTTGGAGTTGGAGTAGTAAGCTTTCTATCAGTTTTTGCAATTTTCTGTATTATTCAGAAAAGAAAACGCGAGGCAGATGATGAAGAACTTTTAGGAATTGATACAAAGCCATACACTTTCAGCTATTCTGAGCTAAAGAATGCTACAAATGACTTTAATCTTGAAAATAAGCTTGGAGAGGGAGGTTTTGGACCTGTTTATAAGGGGACACTGAATGATGGAAGAGTAATTGCTGTGAAACAACTATCAGTGGGATCCCATCAAGGAAAGAGCCAGTTTATAACTGAGATTGCTACTATATCAGCTGTGCAACATCGTAATCTTGTCAAATTATATGGATGTTGCATTGAGGGGAGTAAAAGACTTCTAGTCTATGAGTATCTAGAAAATAAGAGTGTAGATCAAGCATTATTTGGAAATTGCTTAACCCTCAATTGGTCCATGCGCTATGATATATGCTTGGGTGTTGCTAGAGGATTAACTTATTTACATGAAGAGTCACGGCTCCGTATTGTACACCGTGATGTAAAGGCTAGTAATATACTGCTTGATTCTGTGCTTATCCCAAAAATATCTGATTTTGGGTTGGCCAAATTATATGATGAAAACAAGACCCATATAAGCACCCGTGTGGCTGGGACAATTGGATATCTTGCACCGGAGTATGCAATGCGTGGACACCTTACAGAGAAAGCAGATGTTTTTTCCTTTGGTGTTGTCGCTCTAGAGTTAGTTAGTGGGAGGCCAAATTCTGATTCAAGTTTAGAAGGAGAAAAGGTGTATCTTCTGGAATGGGCTTGGCAACTTCATGAAAACAACCGCATAACTGATCTGGTAGATCCTAGACTTTCAGAATTCAACCAGGAAGAATTAAAACGCATAGTAGGAATAGCGCTTTTGTGCACACAAACATCACCAGCTTTAAGGCCATCAATGTCGCGTGTGGTGGCAATGCTTTCAGGAGATATTGAAGTGAGCAATGTAACTACGAAGCCCGGATATCTGACTGATTGGAAATTTGATGACGTGACAAGCTTGATGACTGATATTGCAATCAAAGGATCATCCAATACAAGTTACCCGAATTCATCAGCAAGTACCAGCACAGTGGGTGGTGCATACCATTCACCAATAGATGCTTCTAAACCCATCCTCGATGAGATTCTTAAGGAGGGTAGGTAA 3105 0.4006 MGRCLSRSFAFLLVSALCVFSCFVDVAEAQAANATTDPNEARALNSIFSTWDIEADTTQWNVSGDVCSGRAVDLTTTIDDGTYNPFIKCDCSYDNRTTCHITALKVYALDVVGEIPEELWTLTYLTNLKLDQNYLTGSLSPAIGNLTRMQYMSFGINNLSGNLPKELGNLTELRSLSFSSNNFSGSLPPELGKLTKLEQLYFDSSGNSGPIPSTFASLKNLAIVWASDTELTGRIPDFIGNWSKLQTLRFQGNSFIGSIPSSFSNLTSMSELRISGLSNGSASLEFVRNMKSLIILELKNNNISGSIPSTFGEFLNLTQLDLSFNNITGQIPGPIFNLSLLQYLFLGNNKLNGTLPGQKSSSLLNIDLSYNDLSGSLPSWVNQPNLQLNLVANNLTIDSSSSSGLPTGLNCLQKNFPCNSGVGRYSDFSIKCGGPRITSADQTMYEMDNATLGPATYFVTDTDRWAVSNIGLFTGSNNPVYKSFVSNQFTGTVNPELFQTARLSASSLRYFGLGLENGFYNITLQFAETAILDTPTWKSLGRRVFDIYIQGTRVLKDFDIQKEAGGFSYRAVQKQFRFEVSENYLEIHLFWAGKGTCCIPAQGTYGPLIQAISAVADFIPSVSNNPPSSKKNRTGLIIGVVVGVGVVSFLSVFAIFCIIQKRKREADDEELLGIDTKPYTFSYSELKNATNDFNLENKLGEGGFGPVYKGTLNDGRVIAVKQLSVGSHQGKSQFITEIATISAVQHRNLVKLYGCCIEGSKRLLVYEYLENKSVDQALFGNCLTLNWSMRYDICLGVARGLTYLHEESRLRIVHRDVKASNILLDSVLIPKISDFGLAKLYDENKTHISTRVAGTIGYLAPEYAMRGHLTEKADVFSFGVVALELVSGRPNSDSSLEGEKVYLLEWAWQLHENNRITDLVDPRLSEFNQEELKRIVGIALLCTQTSPALRPSMSRVVAMLSGDIEVSNVTTKPGYLTDWKFDDVTSLMTDIAIKGSSNTSYPNSSASTSTVGGAYHSPIDASKPILDEILKEGR* 1035
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0814 1034 ProSitePatterns Serine/Threonine protein kinases active-site signature. 812 824 IPR008271 GO:0004672|GO:0006468
Apr5g0814 1034 ProSiteProfiles Leucine-rich repeat profile. 316 338 IPR001611 GO:0005515
Apr5g0814 1034 SUPERFAMILY Protein kinase-like (PK-like) 676 989 IPR011009 -
Apr5g0814 1034 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 139 1020 - -
Apr5g0814 1034 SUPERFAMILY L domain-like 93 399 - -
Apr5g0814 1034 ProSiteProfiles Protein kinase domain profile. 693 966 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g0814 1034 Pfam Protein tyrosine and serine/threonine kinase 694 960 IPR001245 GO:0004672|GO:0006468
Apr5g0814 1034 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 139 1020 - -
Apr5g0814 1034 Gene3D - 431 617 - -
Apr5g0814 1034 CDD STKc_IRAK 699 960 - -
Apr5g0814 1034 Pfam Malectin domain 428 612 IPR021720 -
Apr5g0814 1034 Gene3D Ribonuclease Inhibitor 281 430 IPR032675 -
Apr5g0814 1034 Gene3D Ribonuclease Inhibitor 37 280 IPR032675 -
Apr5g0814 1034 Gene3D Transferase(Phosphotransferase) domain 1 769 972 - -
Apr5g0814 1034 Gene3D Phosphorylase Kinase; domain 1 654 768 - -
Apr5g0814 1034 SMART serkin_6 693 960 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0814 Apr-Chr5 11710135 11733440 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0814 106 279 Receptor kinase-like Gene Family AT1G56120 26.286 6.06e-09 58.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Apr5g0814 PK_Tyr_Ser-Thr 9.5e-46 CL0016