Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0162 ATGTCCAGCAAAGGAAAAGACATAGCAGAGGGATCATCAAGATCGTCTTTAGTTGCTGCTGCATCTGATCATCGTCATCATCATCAACAACAGCAACAACAGCAACAACAACCTCTGAGCAGGTATGAATCTCAAAAGAGGAGGGATTGGAACACTTTTGGACAGTACTTGAGGAACCAAAGGCCTCCTGTGGCACTTTCACAGTGCAGTTCCAACCAGGTGCTTGATTTCCTAAGGTACTTGGACCAATTTGGGAAAACAAAAGTGCATGTGCAAGGTTGTCTCTTCTTTGGTCAAGTTGAGCCCCTTGGTCCTTGCACTTGCCCCCTTAAACAAGCTTGGGGAAGTCTTGATGCTCTCATTGGAAGGCTAAGAGCTGCATATGAAGAAAATGGAGGCTTACCTGAGACTAACCCATTTGCTAGTGGTGCCATAAGAGTTTATCTTCATGAGGTTCGAGATTCTCAAGCAAAGGCAAGAGGGATCCCTTATAAGAAGAAAAAGAAGAAGAGGAATCTCATCAAGGCCAACGGGGATAGCTCAAACTTACCTTTTCACCAGTAA 564 0.4468 MSSKGKDIAEGSSRSSLVAAASDHRHHHQQQQQQQQQPLSRYESQKRRDWNTFGQYLRNQRPPVALSQCSSNQVLDFLRYLDQFGKTKVHVQGCLFFGQVEPLGPCTCPLKQAWGSLDALIGRLRAAYEENGGLPETNPFASGAIRVYLHEVRDSQAKARGIPYKKKKKKRNLIKANGDSSNLPFHQ* 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0162 187 MobiDBLite consensus disorder prediction 1 19 - -
Apr5g0162 187 Pfam ALOG domain 32 154 IPR006936 -
Apr5g0162 187 PANTHER PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 6 2 185 - -
Apr5g0162 187 MobiDBLite consensus disorder prediction 1 44 - -
Apr5g0162 187 ProSiteProfiles ALOG domain profile. 41 168 IPR006936 -
Apr5g0162 187 PANTHER PROTEIN G1-LIKE2 2 185 IPR040222 -
Apr5g0162 187 MobiDBLite consensus disorder prediction 164 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0162 Apr-Chr5 1429603 1430166 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g0459 2 5303065 5304955 Apr5g0162 5 1429603 1430166 ECH
Apr2g1856 2 24145293 24145826 Apr5g0162 5 1429603 1430166 ECH
Apr3g0977 3 24654586 24655125 Apr5g0162 5 1429603 1430166 ECH
Apr5g0162 5 1429603 1430166 Apr1g1524 1 24730139 24737957 ECH
Apr5g0162 5 1429603 1430166 Apr3g0977 3 24654586 24655125 ECH
Apr5g0162 5 1429603 1430166 Apr5g0162 5 1429603 1430166 ECH
Apr5g0162 5 1429603 1430166 Apr2g1856 2 24145293 24145826 PCT