Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0158 ATGCCTTCTTCCCCGAAATCCTACTCATCCTACGCGCGCCAAGCCACGCCCTTCTCTTCACGCAGATCCACGCTCTTCATCGTTCTCTCCGCGCTTTTCCTCTTCGGAATCGTCGCGTTGCTGAGGCCGTTTGGAGGTTACCGGTGCGAGAGTCCTCGCCCACGATCGGTTCGGGTGGTGTGGGAGCACGCGCGTGGAAGCAATGAGGTTGGCGATAGGCACAAGGTGATGGGGTTTGTGGGTATTCAAACGGGGTTCGGATCCGTTGGGAGGAGAGAAGCGTTGAGAAAGACTTGGTTTCCCTCCGATCGCCAAGGCCTTCAACGCTTGGAAGAAGCTACTGGGTTGGCTTTTAGGTTTATCATTGGTAGAACAAGTGATAAAGCAAAGATGTCTGCGCTTCAGAAGGAAGTAGCAGAGTATGATGATTTCATTAAGTTGGATATCCAAGAGGAGTACAGTAAGCTCCCATACAAAACGTTAGCTTTCTTCAAGGCTGCTTATGCCCTTTTTGATGCTGAGTTTTATGTCAAAGCTGATGATGACATATATTTAAGGCCAGATCGTCTATCATTACTATTGGCAAAAGAGCGATCTCACCCTCAAACTTACATAGGATGTATGAAAAAGGGACCTGTTTTCACTGATCCAAAACTCAAATGGTATGAGCCACTGTCATTTTTACTTGGAAAGGAGTATTTTCTTCATGCTTATGGTCCGATATATGCTCTTTCTGCTGATGTCGTCTCAAGCTTGGTTGCTCTTAGAAATGACAGTTTCCGGATGTTCAGCAATGAAGATGTTACTATTGGAGCTTGGGTGCTTGCGATGAATGTCAATCATGAGAATAATCATGAACTGTGCGCTACAGACTGTACAGCCACATCTATTGCTGTGTGGGATATTCCGAAGTGTTCAGGCCTATGTAATCCAGAAAAGAAAATGTTGGAACTCCATCAAAAGGAGACCTGCACTAAAAGCCCAACTCTGGAATCGGATGACGAATAG 1008 0.4623 MPSSPKSYSSYARQATPFSSRRSTLFIVLSALFLFGIVALLRPFGGYRCESPRPRSVRVVWEHARGSNEVGDRHKVMGFVGIQTGFGSVGRREALRKTWFPSDRQGLQRLEEATGLAFRFIIGRTSDKAKMSALQKEVAEYDDFIKLDIQEEYSKLPYKTLAFFKAAYALFDAEFYVKADDDIYLRPDRLSLLLAKERSHPQTYIGCMKKGPVFTDPKLKWYEPLSFLLGKEYFLHAYGPIYALSADVVSSLVALRNDSFRMFSNEDVTIGAWVLAMNVNHENNHELCATDCTATSIAVWDIPKCSGLCNPEKKMLELHQKETCTKSPTLESDDE* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0158 335 Pfam Galactosyltransferase 91 284 IPR002659 GO:0006486|GO:0016020|GO:0016758
Apr5g0158 335 Gene3D - 79 308 - -
Apr5g0158 335 PANTHER HEXOSYLTRANSFERASE 3 326 - -
Apr5g0158 335 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 3 326 IPR002659 GO:0006486|GO:0016020|GO:0016758
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0158 Apr-Chr5 1370470 1373969 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0158 18 335 Glycosyltransferase AT1G53290 71.687 1.64e-179 498
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g0158 5 1370470 1373969 Apr5g0158 5 1370470 1373969 ECH
Apr2g0449 2 5203796 5209028 Apr5g0158 5 1370470 1373969 PCT