Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0129 ATGAACATAATGAACAATGACAAGTTGAATGCTGCAGCTCTAGAGGGAGACATAAACCTTCTCTACACACTAATTCAAGAGGATCCACACATTTTAAACCACAATGATTCAACACCATTTATTGACACCCCTTTGCATATTGCTTCATCTTGTGGGCATCTTCACTTTGTCACCGAAATTATGAGATTGAAACCTTCATATGCTTGGAAACTAAATCAACAAGGACTCGCTCCAATTCACCTTGCTTTACTACACGGTCATAACCCAGTGGTTCTTCGCTTTGTAGACATTAACAAAGACCTTGTTAGAGTCAAAGGGAGGGAAGGGATCACTCCTATACATCTTGTGTCTCAGGTTGGATATGTTGACCTTTTAGTTCACTTTCTATTGCTTTGTCCAGATTCCATTCAAGATGTTAATGTTAGAAGTGAGACTTCATTGCATATTGCTGTGAGAAATGAACAATATGAGGCTCTTCAAGTTTTGGTTGGGTGGCTCAAGATAAATGATGAGAAAAGTGCTATGGATTTTGAAGAAACATTGTTGAACTGGAAGGATGATGTAGGCAACACCATTTTGCATGTTTCTGTGCAAACTAATAACTTACAGGCACTGCAATTGTTGGTAGAGACTAATATAGATTTCGGGGCCAAAAATTCAGAGAACAAAACAGCATTAGACATAGCAGCCAATGAAGAGATCAAAAGCATATTAGAAAGAGCTGGAGCAAAACGTGACACACCAGTCACTGAACATGCTCCAACCTTTGTACATAAACTGAAATCAAATATCACAGTTCTGGACAGAATAATAATCCTTATATTTCGCATTAGAAGGGACTTAACAGAGGACCAACGCAATGCTTTTCTAATTGTTGCTGCTCTTGTGGCGACTGCAGCCTATCAATCAGCATTGAGTCCTCCTGGTGGAGTTTATCAAGCTAATGGTGGAGACAGTTCCATCAAGTTCATGGCTACAGCGCCACGAGGAAATGCTGGGAGATCAGTGATGGATGGAGGTGATTTCCTTGCATTATCATTGCTGAATACACTTGCTTTTTTGATATCAACTTTGGTAATTTTTGTTCTGACTCCAAATGGTAAAATGCGCAAAATTCTGTTTGCGCCAATGTTTTGGTTTGCCAATTGCTACCTTTATTCTATGTCTGTGATATCCCCTAACTATGCTTCCATACTGGTTTATTATATTCTGTTGTTTTTGCTCAATTTGTTGACTCTTGTAGTGTGTTTCTCTTTTCCTGTAGTGTACAAGAGACTTTGGGATCCTGCTAACAGGAAAGTTGTAACAAAAAATAGTATGAAACGGAATAATGTGTGGTAG 1341 0.3885 MNIMNNDKLNAAALEGDINLLYTLIQEDPHILNHNDSTPFIDTPLHIASSCGHLHFVTEIMRLKPSYAWKLNQQGLAPIHLALLHGHNPVVLRFVDINKDLVRVKGREGITPIHLVSQVGYVDLLVHFLLLCPDSIQDVNVRSETSLHIAVRNEQYEALQVLVGWLKINDEKSAMDFEETLLNWKDDVGNTILHVSVQTNNLQALQLLVETNIDFGAKNSENKTALDIAANEEIKSILERAGAKRDTPVTEHAPTFVHKLKSNITVLDRIIILIFRIRRDLTEDQRNAFLIVAALVATAAYQSALSPPGGVYQANGGDSSIKFMATAPRGNAGRSVMDGGDFLALSLLNTLAFLISTLVIFVLTPNGKMRKILFAPMFWFANCYLYSMSVISPNYASILVYYILLFLLNLLTLVVCFSFPVVYKRLWDPANRKVVTKNSMKRNNVW* 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0129 446 Pfam Domain of unknown function 282 391 IPR026961 -
Apr5g0129 446 PANTHER ANKYRIN REPEAT FAMILY PROTEIN 12 423 - -
Apr5g0129 446 ProSiteProfiles Ankyrin repeat region circular profile. 188 219 - -
Apr5g0129 446 SMART ANK_2a 142 170 IPR002110 GO:0005515
Apr5g0129 446 SMART ANK_2a 40 69 IPR002110 GO:0005515
Apr5g0129 446 SMART ANK_2a 108 141 IPR002110 GO:0005515
Apr5g0129 446 SMART ANK_2a 188 217 IPR002110 GO:0005515
Apr5g0129 446 SMART ANK_2a 74 103 IPR002110 GO:0005515
Apr5g0129 446 PANTHER HOMEOBOX PROTEIN WARIAI 12 423 - -
Apr5g0129 446 SUPERFAMILY Ankyrin repeat 9 238 IPR036770 -
Apr5g0129 446 ProSiteProfiles Ankyrin repeat profile. 188 220 IPR002110 GO:0005515
Apr5g0129 446 Pfam Ankyrin repeats (many copies) 182 229 IPR002110 GO:0005515
Apr5g0129 446 Gene3D - 2 271 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0129 Apr-Chr5 1152973 1154916 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0129 16 439 Miscellaneous Gene Families AT4G10720 36.574 2.81e-83 260