Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0128 ATGGCTGATATAGCAGGTCTGGTTGAGGCTGCCGGGACAAGATTTAGTTCATTGGAGCTCATTGGACAAGGATCGTTCGGCGACGTCTATAAAGGGTTTGACAAGGAGCTCAACAAAGAAGTCGCTATCAAAGTAATCGATTTGGAAGAATCAGAGGATGAAATTGAGGACATTCAGAAGGAAATTTCTGTTCTGTCACAATGTCGATCTCCATACATTACTGAGTATTATGGTTCCTTTCTCAATCAAACTAAGCTTTGGATAATAATGGAATACATGGCTGGAGGCTCTGTTGCTGATCTACTCCAGTCAGGTCCTCCACTTGATGAAATGTCAATTGCTTGCATTCTGCGTGATTTGCTTCATGCAATTGATTACCTACATAGTGAAGGAAAAATTCACAGGGACATTAAAGCTGCAAACATTTTATTGACTGAGAATGGTGATGTAAAGGTTGCAGATTTTGGTGTTTCTGCACAGTTAACAAGGACTATATCAAGGAGAAAGACATTTGTAGGAACACCATTCTGGATGGCACCTGAGGTTATTCAAAATTCAGAAGGATATAATGAGAAGGCAGATATCTGGTCTCTGGGGATTACTGCAATTGAAATGGCAAAAGGAGAGCCTCCACTTGCTGATCTTCATCCAATGAGAGTGCTTTTCATAATACCCCGAGAGAATCCACCTCAGCTGGATGAACATTTTTCTCGTTCCATGAAAGAATTTGTTTCACTGTGTTTGAAGAAGGTTCCTGCTGAGAGGCCAAGTGCTAAGGAACTTCTCAAAAACCGTTTCATTCGGAATGCAAGGAAGAGTCCAAAGCTTTCAGAGAGAATCAGGGAGCGTCCGAAGTACCAAATAAAGGAAGATCAGGTGGCACCTAGAAATGCCCCAAGAGGAATGGGGGAGGCATCTGATACCATTAAGGTGGCAAGAGATTTAAGGGGTGAAGATACTAATCAGCCTAGTGGTCAGGGTAAAACCCTTAGAAGTTCTGGGTGGGACTTCAGCATTGGTGGACCACAGGGTACTGGAACCATTCGTAATGTGTCACGGCCACCTCAGTTTAGAGATAAGAAAACTGAATTTTCAAATCATCAGTTTAACCAAAGAAAAACTCCAGAGGGTGCCTATCAAGGGGGATCTGCCAGGAGAAGTGCACCTAATGAGTCACTAGAAAGTTCTTTAGGAAAAGATCTTGGAGTTCCCTACCATGACGAGTATCCAGATAATCACCTTGAAGATCAGGATGAATTGTCTGGGAATGGATCAGGAACTGTTGTTGTTAGGTCTCCAAAACGGTCACAGCCATCGCTGTTTCGTGATCAAAGTTCCCAGTCCAGCAGCGGCTATTTTTCTTTTGATGATGCTTCTACTAGTGGAACTGTTGTTTTGCGCAGCCAGCATGATGATTCTGATTCTCCCCAGACACCAAGGTCAAGACTGGGGCTTAATAGCAGAAATTTAAGTGCCTCCTCGGAAGATAGTGCTACAAATCTTGCTGAGGCAAAGGCTGCTATACAAGGAGGATTAAGGAAAGGGAATGCACGAGAGAGATTTTCCCTGGGAAAACTGAACAATGATGTACAAGAAAGCAGGAGAGATCAAATGTCAAGCGGCTCTGATTCTTCCAGACCATCCCGTGAATACATTGATGCACCAAAGGGAATATCAAGATCACATTATGCTAGTGATGATAAAGAAAGTGCCAAAATAATCTCATCCTCTGTGCCATTGTCAGTTTTGCTTATTCCTTCATTAAAAGAGAGTATTGCTGATGATCCAGAAGGGTCAATTGTAGAAGATGTTATCAATACTCTTGTAAACATGGAAAGGACAAAGCCTAAATCCTGTGATGTTCTTGTCAAGAAGTTGCTTCAGCGGTTGGCTAGTTCAAAGGAATCTTCATTGAAGGACCTGCAAGAACTGGCTGGCCAAATATTCTGCAAGACCAAGCCAGCTGAAGAAACCCGAAATGCAGAGCCTGATACCAAGAAGAAACAGCAAAACAAGGAAGTTCATTCAAATAGCAACTTAAGCCCTCTTGCTAGATTTCTTCTCTCAAGATGGCAAGGCCAAACCTCACGGGATCTAAATCCAGCTTGA 2109 0.4272 MADIAGLVEAAGTRFSSLELIGQGSFGDVYKGFDKELNKEVAIKVIDLEESEDEIEDIQKEISVLSQCRSPYITEYYGSFLNQTKLWIIMEYMAGGSVADLLQSGPPLDEMSIACILRDLLHAIDYLHSEGKIHRDIKAANILLTENGDVKVADFGVSAQLTRTISRRKTFVGTPFWMAPEVIQNSEGYNEKADIWSLGITAIEMAKGEPPLADLHPMRVLFIIPRENPPQLDEHFSRSMKEFVSLCLKKVPAERPSAKELLKNRFIRNARKSPKLSERIRERPKYQIKEDQVAPRNAPRGMGEASDTIKVARDLRGEDTNQPSGQGKTLRSSGWDFSIGGPQGTGTIRNVSRPPQFRDKKTEFSNHQFNQRKTPEGAYQGGSARRSAPNESLESSLGKDLGVPYHDEYPDNHLEDQDELSGNGSGTVVVRSPKRSQPSLFRDQSSQSSSGYFSFDDASTSGTVVLRSQHDDSDSPQTPRSRLGLNSRNLSASSEDSATNLAEAKAAIQGGLRKGNARERFSLGKLNNDVQESRRDQMSSGSDSSRPSREYIDAPKGISRSHYASDDKESAKIISSSVPLSVLLIPSLKESIADDPEGSIVEDVINTLVNMERTKPKSCDVLVKKLLQRLASSKESSLKDLQELAGQIFCKTKPAEETRNAEPDTKKKQQNKEVHSNSNLSPLARFLLSRWQGQTSRDLNPA* 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0128 702 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Apr5g0128 702 MobiDBLite consensus disorder prediction 655 673 - -
Apr5g0128 702 SUPERFAMILY Protein kinase-like (PK-like) 13 296 IPR011009 -
Apr5g0128 702 CDD STKc_MST3_like 14 287 - -
Apr5g0128 702 PANTHER STERILE20-LIKE KINASE, ISOFORM B-RELATED 1 700 - -
Apr5g0128 702 MobiDBLite consensus disorder prediction 519 566 - -
Apr5g0128 702 MobiDBLite consensus disorder prediction 319 352 - -
Apr5g0128 702 MobiDBLite consensus disorder prediction 273 455 - -
Apr5g0128 702 Gene3D Transferase(Phosphotransferase) domain 1 12 299 - -
Apr5g0128 702 SMART serkin_6 15 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g0128 702 MobiDBLite consensus disorder prediction 404 418 - -
Apr5g0128 702 MobiDBLite consensus disorder prediction 419 455 - -
Apr5g0128 702 MobiDBLite consensus disorder prediction 549 566 - -
Apr5g0128 702 Pfam Protein kinase domain 16 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g0128 702 MobiDBLite consensus disorder prediction 533 547 - -
Apr5g0128 702 MobiDBLite consensus disorder prediction 273 290 - -
Apr5g0128 702 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 700 - -
Apr5g0128 702 MobiDBLite consensus disorder prediction 654 681 - -
Apr5g0128 702 ProSiteProfiles Protein kinase domain profile. 15 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g0128 702 MobiDBLite consensus disorder prediction 467 498 - -
Apr5g0128 702 Coils Coil 41 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0128 Apr-Chr5 1140482 1150638 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0128 1 699 MAP Kinase Kinase Kinase Kinase AT3G15220 65.242 0.0 861
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-YSK Apr5g0128 Pkinase 2.2e-68 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g0128 5 1140482 1150638 Apr5g0128 5 1140482 1150638 ECH