Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0051 ATGGCCACTCTTCCTCTTATGTTTCTTGTTGCCAAGTTACTTTTGTCCTTCTCTAAAATTTCAGCTGAAACAGATACCCTTACTCAGTTTCAATCACTTCATGAGAACATGACCTTGGTTTCAAACGATGGAACCTTTGAGTTGGGTTTCTTCAACCCAGGTAATTCCACAAACCAATACATAGGAATATGGTACAAAAATATACCAATTAGAACTATCGTTTGGGTTGCCAACCGTGACAACCCAATCAAAGACAATTCCAGCAAGTTGAGCATAAGCATGGAGGGAAACCTTGTACTTCTCAACCACAACAACACAGTTATTTGGTCAACAAACGCAACAACGAAAAGGGTCAACGTAGTAGCACAGCTATTAAACCCAGGCAACTTGGTTCTAAGAGATGAGAAAGACAACAATCCTCAAAACTACTTGTGGCAAAGCTTTGATTACCCTTCAGATACACTTTTGCCTGGAATGAAAGTGGGATGGGACTTCAAAAAAGGCCTCAATAGGCGTGTAACAGCTTGGAGAAACTGGAATGACCCTTCTCTAGGGGACTTTAAATGGGGTATTATACCTACAAATAACCCTGAAGCGGTTATGTGGAAGGGCTCAAAAGAGTTCTATAGAAGTGGCCCTTCAGATGGCATTAAATTCAGTGGTAGTCCATTTTTGGCATATAATTCAGTAGTCAACTACACATTTGTGTCCAATAACGATGAATTCTATTTTACTTATAGCATCGGTGATAAGTCAGTGATTTCAAGAATTGTGATGAATCAAACGGTTTATACACGCCAACGCTTGACGTGGAATCGTGATAGCCAAACATGGATAATGTCTTCAGTATTGCCTGGTGATTATTGTGACAACTATAATCTTTGTGGGTCATTTGGGATCTGTGTAATTAATGAGTCTCCAGTGTGCAAATGTTTGGATGGGTTCAAGCCAAAATCGCCACAAAATTGGACCCAAATGAATTGGAATGAAGGATGTGTCCACAATGGAACATGGAGTTGCAGGGAAAAGAACAAGGATGGTTTTCAAAAATTTAGTAACGTGAAGGCACCAGACACTAAGAGATCATGGGTCAATTCAAGTTTGACTCTTGATGAATGCAAGAACAAGTGTTGGGAAAATTGTTCTTGTATGGCTTATGCAAATTCAGACATCAGGGGAGAAGGTAGTGGCTGTGCCATTTGGTTCGATGATCTATTAGATTTAAGAGTGATTCAAAATGGTGGACAAGATATTTATGTTAGATTGGCGATGTCCGAAATAGGTGGTTCAAAGAAAAATGTGGCTGTGATCACAAGTGCTGTGTTTTCTGTTATTGCGATATTTTTAATTTTCATATTCATTCATTGGAGGAGCAACACAAAAATCAAAGAGATCATCACAAGGATAAGAGTAAAGAACAATGAAAGCAAGCAAGAAGACTTGGAACTACCATTATTTGACCTTGCCTTAATGGCACATGCTACAGATCACTTCTCAAATCAAAACAAGCTTGGTGAAGGGGGTTTTGGACCTGTATACAGGGGAACACTACCAGATGGACAAGAGATTGCGGTTAAGAGGCTTTCACAAACATCTATACAAGGATTAAAAGAATTTAAGAATGAAGTTATGCTATGTGCTAAACTACAACATCGAAATCTTGTTAAAGTTCTTGGCTGCTGCATTCAAGATAATGAGAAATTACTTGTATACGAATTTATGGCCAACAAAAGCCTTGATTTTTTTCTCTTTGATTCTGATCGCAGTAAACTTCTAGATTGGCCAAAGCGCTTTTGCATTATAAATGGAATTGCCCGTGGACTACTCTATCTTCATCAAGACTCAAGACTAAGGATCATACACAGAGATCTTAAGGCAAGTAATGTCTTATTAGATTATGAGATGAATCCAAAAATTTCAGATTTTGGCCTAGCTCGAATGTGCCGAGGTGATCAAATTGAAGGGAATACAAGCAAAGTAGTTGGTACATTCGGTTATATGGCGCCAGAATATGCTTTTGACGGAATATTCTCTATCAAATCCGATGTATTTAGTTTTGGCATATTATTGCTAGAGATTATAAGTGGCAAGAAAAATTCTAGACTCTTCTATCTAAGTGACTACAATAATCTTACAGGGCAAGCATGGAAGTCATGGAAAGAGGGTGTTCCAATGCAGTTCATTGATGCTAGTTTGGAGGACTCTTGTATTCTCTCTGAAGTCTTGCGATGCATTCATATTGGTCTTTTATGTGTGCAGCATCATCCAAAAGATAGGCCAAACATGAGCACTGTAGTGGTATTATTGAGCAACGAGGGTGCATTGCCTGTACCTAAGGATCCGTGTTACTTAACAGAAGAAATCTCAACTAAAGGAGACTGTGATTTTGAGAACCTATCACCCTATTCAGTTAACGATGTCACTATCTCAAATTTGAGTGAGAGATAG 2448 0.3864 MATLPLMFLVAKLLLSFSKISAETDTLTQFQSLHENMTLVSNDGTFELGFFNPGNSTNQYIGIWYKNIPIRTIVWVANRDNPIKDNSSKLSISMEGNLVLLNHNNTVIWSTNATTKRVNVVAQLLNPGNLVLRDEKDNNPQNYLWQSFDYPSDTLLPGMKVGWDFKKGLNRRVTAWRNWNDPSLGDFKWGIIPTNNPEAVMWKGSKEFYRSGPSDGIKFSGSPFLAYNSVVNYTFVSNNDEFYFTYSIGDKSVISRIVMNQTVYTRQRLTWNRDSQTWIMSSVLPGDYCDNYNLCGSFGICVINESPVCKCLDGFKPKSPQNWTQMNWNEGCVHNGTWSCREKNKDGFQKFSNVKAPDTKRSWVNSSLTLDECKNKCWENCSCMAYANSDIRGEGSGCAIWFDDLLDLRVIQNGGQDIYVRLAMSEIGGSKKNVAVITSAVFSVIAIFLIFIFIHWRSNTKIKEIITRIRVKNNESKQEDLELPLFDLALMAHATDHFSNQNKLGEGGFGPVYRGTLPDGQEIAVKRLSQTSIQGLKEFKNEVMLCAKLQHRNLVKVLGCCIQDNEKLLVYEFMANKSLDFFLFDSDRSKLLDWPKRFCIINGIARGLLYLHQDSRLRIIHRDLKASNVLLDYEMNPKISDFGLARMCRGDQIEGNTSKVVGTFGYMAPEYAFDGIFSIKSDVFSFGILLLEIISGKKNSRLFYLSDYNNLTGQAWKSWKEGVPMQFIDASLEDSCILSEVLRCIHIGLLCVQHHPKDRPNMSTVVVLLSNEGALPVPKDPCYLTEEISTKGDCDFENLSPYSVNDVTISNLSER* 816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0051 815 ProSiteProfiles Bulb-type lectin domain profile. 24 145 IPR001480 -
Apr5g0051 815 Pfam D-mannose binding lectin 72 177 IPR001480 -
Apr5g0051 815 Gene3D Hepatocyte Growth Factor 339 422 - -
Apr5g0051 815 SUPERFAMILY Protein kinase-like (PK-like) 481 769 IPR011009 -
Apr5g0051 815 SMART blect_4 30 151 IPR001480 -
Apr5g0051 815 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 32 808 - -
Apr5g0051 815 CDD PAN_AP_plant 339 423 - -
Apr5g0051 815 CDD STKc_IRAK 504 766 - -
Apr5g0051 815 Pfam PAN-like domain 340 408 IPR003609 -
Apr5g0051 815 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 32 808 - -
Apr5g0051 815 ProSiteProfiles Protein kinase domain profile. 498 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g0051 815 Pfam S-locus glycoprotein domain 209 319 IPR000858 GO:0048544
Apr5g0051 815 Gene3D - 18 148 IPR036426 -
Apr5g0051 815 ProSiteProfiles EGF-like domain profile. 285 321 IPR000742 -
Apr5g0051 815 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 182 IPR036426 -
Apr5g0051 815 CDD B_lectin 31 151 IPR001480 -
Apr5g0051 815 PIRSF SRK 1 815 IPR024171 GO:0004674
Apr5g0051 815 SMART serkin_6 498 769 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g0051 815 ProSitePatterns Serine/Threonine protein kinases active-site signature. 619 631 IPR008271 GO:0004672|GO:0006468
Apr5g0051 815 Pfam Protein tyrosine and serine/threonine kinase 500 767 IPR001245 GO:0004672|GO:0006468
Apr5g0051 815 SMART ntp_6 343 422 IPR003609 -
Apr5g0051 815 ProSiteProfiles PAN/Apple domain profile. 340 423 IPR003609 -
Apr5g0051 815 Gene3D Transferase(Phosphotransferase) domain 1 574 774 - -
Apr5g0051 815 Gene3D Phosphorylase Kinase; domain 1 471 573 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0051 Apr-Chr5 475899 479227 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0051 486 815 Receptor kinase-like Gene Family AT4G11480 54.118 1.81e-118 370
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Apr5g0051 PK_Tyr_Ser-Thr 3.8e-47 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g0051 5 475899 479227 Apr5g0051 5 475899 479227 ECH
Apr2g0334 2 3979914 3983266 Apr5g0051 5 475899 479227 PCT