Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0049 ATGGAGATTCTTCCCGTTATGCTTCTTGTAACCAACATACTAATTTTCTTCTCTAAAATATCTTTTGCTGTAGATATCATTGCCCAGAATGAGTCACTTTTCTATAACACGACCTTAGTTTCAAAGGATGAAACCTTTGAGTTGGGTTTCTTCAACCCGGGTAATTCTTCAAACCGTTACATAGGAATCTGGTACAAAAATATACCAGACAGAACAGTAGTTTGGGTTGCAAACCGTGGCAACCCAATCAAAGACGACTCCAGCAAGTTGATGATAAGCACAGAGGGAAACCTCGTACTTCTCAATCAAAACAACACCATTATTTGGTCAACAAACGCAACAACAAAAAGGGTCAACGTAGTAGCACAGCTATTAAACTCGGGTAACTTTGTTCTAAGAGATGAGAAAGACAACGATCCTCAAAACTACTTGTGGCAGAGCTTTGATTACCCTTCAGACTCCTTTCTACCAGGAATGAAAATTGGATGGGACTTCAGAAAGGGCCTTGATAGGCGCATAACTGCATGGAGAAATTGGGATGACCCTTCTATTGGGGACTTTACATGGGGTGTTGTACCTACAAATAACCCTGAAGAGGTAATGTTGAGAGGGTCAAAAGAGGTATTCAGAAGTGGCCCTTCAACGGGTACTCAATTTAGTGGCAACCCTTCAGTGATAAACAATACAATACTTAACTACTCTTTTGTGTCTAACAATGATGAGTTATATGTCACAGCTAGCCTCATTGATAAATCGGTGATCACAAGAATTGTGTTGAATCAAACACTTTCTGTTCGCCAACGCTTGACATGGAGCAAACAAAGCAAAACATGGAGGATGTCTTCACAATTGCCTAGTGATTTATGTGACACCTATAACATTTGTGGTGCTTTTGGGATTTGTGTCATTGGTAATGCACCCGTGTGCAATTGTTTAGATGGGTTCAAGCCCAAATCGCCTCAAAATTGGACCCAAATGGATTGGAATGAAGGATGTGTGCACAATGAAAGGTGGAGGTGTAAGGAAAAGAATAAGGATGGTTTTAAAAAATTTAGTAATGTGAAGGCACCGGACACTAAAAGATCATGGGTTAATGCAAGTATGACACTTGATGAATGTAGGATCAAGTGTTGGGAAAATTGTTCTTGTTCGGCTTATACAAATACAGACCTTAGGGGAGGTGGTCGTGGCTGTGCCATTTGGTTTGGTGATTTGTTAGATATGAGATTGATTGCAAATGGTGGACAAGATGTGTATATTAGATTGCCGGTGGAAGAAACAGAAAATCAAGGTGTAGAAGGTGGGTCAAAACAGAAGGTGGTTGTGATCGCAAGCACCATCTCCTCTGTTATTGCGATAGTACTAATTTTCGTATTTGTTTGTTGGAGGAACAAAACAAAAATCAAAGAGATCTTAATGAGGATAAAAGAGGAGAACAACAAGAATAAAGAGGAAGACTTTGAGCTACCTCTGTTTGACCTTGTCTCGATAGCGCATGCCACTGATCACTTTTCAAATCACAATAAACTTGGTGAAGGTGGTTTTGGGCCTGTATACAGGGGAAAACTGCTGGATGGACAAGAAATAGCTGTCAAGAGGCTTTCAAGAACATCTGGACAAGGGTTAAAAGAATTTCAAAATGAGGTTATTTTTTGTGCCAAACTTCAGCATCGAAATCTTGTTAAAGTTCTTGGTTGTTGTATTCAAGATAACGAGAAATTACTCGTATACGAATTTATGGCCAACAAAAGCCTTGATTTTTTTCTCTTTGATTCTGATCGCAGTAAACTTCTAGATTGGCCTAAGCGTTTTTGCATCATAAATGGAATTGCCCGTGGACTACTTTATCTTCATCAAGACTCAAGATTAAGGATCATACACAGAGATCTTAAGGCAAGTAATATTTTGTTAGATAATGAGATGAACCCAAAAATTTCAGATTTTGGTTTGGCTCGAATGTGTGGAGGTGATCAAATTGAAGGAAAAACAAATAGAGTAGTTGGCACATTTGGTTATATGGCTCCTGAATATGCTTTTGATGGAATATTCTCCATCAAATCTGATGTATTTAGTTTTGGTGTATTATTACTTGAGATAGTAAGTGGTAAAAAAAATAGCAGACTCTTCTATCCGAATGACTACGATAACCTTACTGGACATGCATGGAAGTTGTGGAAAGAAGGCAATCCAACACAATTCATTGATTCTAGTTTGGAGGATTCGTGTATTCTATCTGAAGCTATACGTTGCATTCATATTGGTCTTTTATGTGTTCAACAACATCCTAATAATAGGCCATCAATGGCATCTATAGTTGTATTACTGAGCAACGAAAATGAGTTGCCTCTGCCGAAGGATCCTAGCTACTTAACCGAAGAAAACTCAATTGAAAAACATATTTATGCAGAAAATACAACATCTTCTTCGGTTAATGACCTCACTATCTCAATTTTAAGTGACAGATAG 2466 0.3836 MEILPVMLLVTNILIFFSKISFAVDIIAQNESLFYNTTLVSKDETFELGFFNPGNSSNRYIGIWYKNIPDRTVVWVANRGNPIKDDSSKLMISTEGNLVLLNQNNTIIWSTNATTKRVNVVAQLLNSGNFVLRDEKDNDPQNYLWQSFDYPSDSFLPGMKIGWDFRKGLDRRITAWRNWDDPSIGDFTWGVVPTNNPEEVMLRGSKEVFRSGPSTGTQFSGNPSVINNTILNYSFVSNNDELYVTASLIDKSVITRIVLNQTLSVRQRLTWSKQSKTWRMSSQLPSDLCDTYNICGAFGICVIGNAPVCNCLDGFKPKSPQNWTQMDWNEGCVHNERWRCKEKNKDGFKKFSNVKAPDTKRSWVNASMTLDECRIKCWENCSCSAYTNTDLRGGGRGCAIWFGDLLDMRLIANGGQDVYIRLPVEETENQGVEGGSKQKVVVIASTISSVIAIVLIFVFVCWRNKTKIKEILMRIKEENNKNKEEDFELPLFDLVSIAHATDHFSNHNKLGEGGFGPVYRGKLLDGQEIAVKRLSRTSGQGLKEFQNEVIFCAKLQHRNLVKVLGCCIQDNEKLLVYEFMANKSLDFFLFDSDRSKLLDWPKRFCIINGIARGLLYLHQDSRLRIIHRDLKASNILLDNEMNPKISDFGLARMCGGDQIEGKTNRVVGTFGYMAPEYAFDGIFSIKSDVFSFGVLLLEIVSGKKNSRLFYPNDYDNLTGHAWKLWKEGNPTQFIDSSLEDSCILSEAIRCIHIGLLCVQQHPNNRPSMASIVVLLSNENELPLPKDPSYLTEENSIEKHIYAENTTSSSVNDLTISILSDR* 822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0049 821 SMART serkin_6 504 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g0049 821 Gene3D - 19 148 IPR036426 -
Apr5g0049 821 ProSitePatterns Serine/Threonine protein kinases active-site signature. 625 637 IPR008271 GO:0004672|GO:0006468
Apr5g0049 821 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 182 IPR036426 -
Apr5g0049 821 SUPERFAMILY Protein kinase-like (PK-like) 487 775 IPR011009 -
Apr5g0049 821 Pfam S-locus glycoprotein domain 209 319 IPR000858 GO:0048544
Apr5g0049 821 ProSiteProfiles Bulb-type lectin domain profile. 24 145 IPR001480 -
Apr5g0049 821 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 32 814 - -
Apr5g0049 821 PIRSF SRK 1 821 IPR024171 GO:0004674
Apr5g0049 821 Pfam D-mannose binding lectin 72 177 IPR001480 -
Apr5g0049 821 CDD PAN_AP_plant 341 423 - -
Apr5g0049 821 SMART ntp_6 343 422 IPR003609 -
Apr5g0049 821 Pfam PAN-like domain 340 408 IPR003609 -
Apr5g0049 821 ProSiteProfiles Protein kinase domain profile. 504 781 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g0049 821 ProSiteProfiles EGF-like domain profile. 285 321 IPR000742 -
Apr5g0049 821 CDD STKc_IRAK 510 772 - -
Apr5g0049 821 CDD B_lectin 30 151 IPR001480 -
Apr5g0049 821 Gene3D Phosphorylase Kinase; domain 1 477 579 - -
Apr5g0049 821 Gene3D Transferase(Phosphotransferase) domain 1 580 784 - -
Apr5g0049 821 Pfam Domain of unknown function (DUF3403) 776 819 IPR021820 GO:0004674
Apr5g0049 821 SMART blect_4 30 151 IPR001480 -
Apr5g0049 821 ProSiteProfiles PAN/Apple domain profile. 340 423 IPR003609 -
Apr5g0049 821 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 32 814 - -
Apr5g0049 821 Pfam Protein tyrosine and serine/threonine kinase 507 773 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0049 Apr-Chr5 461122 465222 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0049 428 797 Receptor kinase-like Gene Family AT4G23190 48.936 2.24e-122 379
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Apr5g0049 PK_Tyr_Ser-Thr 4.5e-47 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g0049 5 461122 465222 Apr5g0049 5 461122 465222 ECH
Apr2g0333 2 3972968 3977450 Apr5g0049 5 461122 465222 PCT