Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0977 ATGTCTAGCAGTGGCAGTAGTCATGGGAAGGAATTGGCAGAAGGATCATCAACAAATATTGCAATAGATTATCATCATCAGCAGCAGAATCCAGTGACACCTAGCCGCTATGAGTCACAAAAGAGAAGGGATTGGAACACTTTTGGACAATACTTGAAGAACCAAAGACCCCCAGTTCCACTCTCTCAGTGCAATTGCAACCACGTGCTTGATTTCCTTCGCTACCTTGACCAGTTTGGGAAAACCAAGGTTCACATACAAGGTTGCATGTTCTATGGGCAACCAGAACCCCCAGCACCCTGCACTTGCCCTCTTAGACAAGCTTGGGGAAGCCTTGATGCTCTCATTGGAAGGCTTAGAGCTGCATATGAGGAAAATGGTGGGCCCCAAGAGACTAACCCTTTTGCAAGTGGCTCCATTCGTGTGTACCTTAGGGAAGTCAGAGAGTGCCAAGCCAAGGCTAGAGGTATACCTTACAAGAAGAAAAAGAAGAGCACAAAGGGTCATGAAGAATCAAGCTCCACCATCCATTTCTCTTGA 540 0.4667 MSSSGSSHGKELAEGSSTNIAIDYHHQQQNPVTPSRYESQKRRDWNTFGQYLKNQRPPVPLSQCNCNHVLDFLRYLDQFGKTKVHIQGCMFYGQPEPPAPCTCPLRQAWGSLDALIGRLRAAYEENGGPQETNPFASGSIRVYLREVRECQAKARGIPYKKKKKSTKGHEESSSTIHFS* 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0977 179 Pfam ALOG domain 26 149 IPR006936 -
Apr3g0977 179 PANTHER PROTEIN G1-LIKE2 6 179 IPR040222 -
Apr3g0977 179 ProSiteProfiles ALOG domain profile. 36 163 IPR006936 -
Apr3g0977 179 PANTHER DUF640 FAMILY PROTEIN 6 179 - -
Apr3g0977 179 MobiDBLite consensus disorder prediction 1 20 - -
Apr3g0977 179 MobiDBLite consensus disorder prediction 158 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0977 Apr-Chr3 24654586 24655125 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0977 3 24654586 24655125 Apr3g0977 3 24654586 24655125 ECH
Apr3g0977 3 24654586 24655125 Apr2g0459 2 5303065 5304955 ECH
Apr3g0977 3 24654586 24655125 Apr5g0162 5 1429603 1430166 ECH
Apr1g1524 1 24730139 24737957 Apr3g0977 3 24654586 24655125 ECH
Apr2g0459 2 5303065 5304955 Apr3g0977 3 24654586 24655125 ECH
Apr5g0162 5 1429603 1430166 Apr3g0977 3 24654586 24655125 ECH
Apr2g1856 2 24145293 24145826 Apr3g0977 3 24654586 24655125 ECH
Apr3g0977 3 24654586 24655125 Apr1g1524 1 24730139 24737957 ECH