Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1863 ATGCAACAACCCACCTTGGATTCAAAACGACTCGATCCCAGTTCCACCGTCAACGGAAAACCAACTAACCTCTCCGGCGAGCTCTCTGGGGCGGCGAGAATCTCCAGACCGGGCCACCGGAGATCGGTCTCCGCCGGAGCGCCGTTAATCTACTCCGGCGGAGCGAGTTCGAGTCCAACATTACTCCCGAGCGGTAACATTTGCCCCTCCGGGAAGATCCTGAAACCGGGTTTACCCTCTCGCGGACCCAACCGAACCGATGTGTTGGGTTCGGGGACAGTGAACTACGGGCGCGGTAGCATAATGCGAGGGTCGGGTGCTAATCATGTGGGTGCAGGTGCATCGGCGCTTACGGTGAAGCGCGCGATGAGTGGCTCCGATCCCGAGGAGGTGAAGAGGTTGGGGAACGAGTTGTATAGGAGCGGGAACTTCGTGGAGGCGTTGGCATTGTACGATCGTGCCGTCGCGATTTCGCCGGGGAACGCCGCTTGCCGGAGCAATCGTGCGGCGGCGCTGACGGCGTTGGGGAGGTTGGGGGAGGCGGCAAGGGAGTGTGACGAGGCTGTGAAGTTGGAGGGTGGTTATGCGAGAGCTCATAAGAGACTCGCATCTCTTTATCTACGGTTTGGGCAGGTTGAGAATTCGCGGCGGCATCTCTGTCTCTCTGGGATTGAAGAGGATGAATCTGAGGAGCAGAAGTTGTTGTTGTTGGATAAGCATTTGAAGCGATGTGCAGATGCAAGAATGATTGGTGATTGGAAGAGGGCACTTAGGGAATCTGAGGCAGCCATTGCTGTTGGTGCTGATTTTTCCCCTCAGATTGTTGCTTGCAAGGCGGAAGCTTATTTAAAACTGCATCAACTTGAGGATGCTGAATCGAGGCTCTCAAACATGCCAAAGTTGGAAGGGTGTCCTCTACCATGTTCTCAAGTCAAGTTCTTTGGTATGGTTGGTGAAGCCTATGTTCATTTTGTGTCTGCGCAGGTTGAGATGGCATTGGGAAGGTTTGAGAATGCTGTCGCGGCAGCAGAAAAAGCAAGCCTGTTAGATTACAGTAATGTTGAAGTGGGTAGGATTGTAAATATTGTTAAAATGGTGGCAAAAGCTCGTTCCAGGGGCAATGATCTTTTCAGCTCTGGCAAATTTTCTGAAGCTTGTTCTGCTTATGGAGAAGGCCTTAAGTATGACAGTTCCAATTATGTTCTATATTGCAATAGAGCTATTTGTTGGTCTAAACTTGGACTGTGGGAACAATCAGTTCAAGATTGCAATCAAGCTCTTAACATTCAACCAAATTACACCAAGGCTCTTTTCCGCAGGGCTGCATCAAATGCAAAGCTTGAAAGATGGACAGAAGTTGTTAAAGATTATCAGGCATTAAAACGTGAACTCCCTAATGACAATGAAGTTGCTGAGTCTCTTCATCAAGCTCAACTAGCATTAGAAAAATCTCGACAAGTGGTATATGGTACCAAGTTTGGAGTTGAAGTTGAAGAAATCTCTGCATTAGATAAATTTAAAGCTGCCATTGCATCTGCTGGTGTTTCGGTAGTTTATTTCAAAGAGGCATCAAATGAACTATGTGAAGAAATATCTCCATTCATAAATACATTGTGTGTTAGATATCCCTCTATTAAATTTATTAAGGTGGACGTGGAGGAGTGTCTGGCAATAGCAAAAGCTGAAAGCATAAGAAGTGTTCCAACTTTTAAAATTTATAAAAATGGAGAAAAGGTGAAGGAGATGATCCGGCCAACCCATCAGTTTTTAGAGGATTCAGTAAGGAAAAGTAGTAGTAGTCTCTAG 1806 0.474 MQQPTLDSKRLDPSSTVNGKPTNLSGELSGAARISRPGHRRSVSAGAPLIYSGGASSSPTLLPSGNICPSGKILKPGLPSRGPNRTDVLGSGTVNYGRGSIMRGSGANHVGAGASALTVKRAMSGSDPEEVKRLGNELYRSGNFVEALALYDRAVAISPGNAACRSNRAAALTALGRLGEAARECDEAVKLEGGYARAHKRLASLYLRFGQVENSRRHLCLSGIEEDESEEQKLLLLDKHLKRCADARMIGDWKRALRESEAAIAVGADFSPQIVACKAEAYLKLHQLEDAESRLSNMPKLEGCPLPCSQVKFFGMVGEAYVHFVSAQVEMALGRFENAVAAAEKASLLDYSNVEVGRIVNIVKMVAKARSRGNDLFSSGKFSEACSAYGEGLKYDSSNYVLYCNRAICWSKLGLWEQSVQDCNQALNIQPNYTKALFRRAASNAKLERWTEVVKDYQALKRELPNDNEVAESLHQAQLALEKSRQVVYGTKFGVEVEEISALDKFKAAIASAGVSVVYFKEASNELCEEISPFINTLCVRYPSIKFIKVDVEECLAIAKAESIRSVPTFKIYKNGEKVKEMIRPTHQFLEDSVRKSSSSL* 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1863 601 MobiDBLite consensus disorder prediction 1 40 - -
Apr2g1863 601 PANTHER TPR REPEAT-CONTAINING THIOREDOXIN 28 596 IPR044534 -
Apr2g1863 601 SUPERFAMILY Thioredoxin-like 409 594 IPR036249 -
Apr2g1863 601 ProSiteProfiles TPR repeat profile. 128 161 IPR019734 GO:0005515
Apr2g1863 601 SUPERFAMILY TPR-like 129 218 IPR011990 GO:0005515
Apr2g1863 601 Gene3D Tetratricopeptide repeat domain 126 484 IPR011990 GO:0005515
Apr2g1863 601 PANTHER TPR REPEAT-CONTAINING THIOREDOXIN TTL4 28 596 - -
Apr2g1863 601 Gene3D Glutaredoxin 485 599 - -
Apr2g1863 601 CDD TRX_family 506 591 - -
Apr2g1863 601 SUPERFAMILY TPR-like 244 356 IPR011990 GO:0005515
Apr2g1863 601 Pfam Tetratricopeptide repeat 134 189 - -
Apr2g1863 601 Pfam Thioredoxin 504 585 IPR013766 -
Apr2g1863 601 SMART tpr_5 320 353 IPR019734 GO:0005515
Apr2g1863 601 SMART tpr_5 434 467 IPR019734 GO:0005515
Apr2g1863 601 SMART tpr_5 400 433 IPR019734 GO:0005515
Apr2g1863 601 SMART tpr_5 128 161 IPR019734 GO:0005515
Apr2g1863 601 SMART tpr_5 366 399 IPR019734 GO:0005515
Apr2g1863 601 SMART tpr_5 162 195 IPR019734 GO:0005515
Apr2g1863 601 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1863 Apr-Chr2 24203262 24206105 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1863 2 24203262 24206105 Apr2g1863 2 24203262 24206105 ECH
Apr5g0159 5 1390410 1394172 Apr2g1863 2 24203262 24206105 PCT