Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1857 ATGGGTAGTCGTAACATTGAGAAGATGGCCTCAATTGATGCTCAGTTGAGGTTGCTAGCACCACGCAAGGTCTCTGATGATGACAAACTCGTTGAGTATGATGCTTTGTTGTTGGATCGCTTCCTTGACATTCTTCAGGACTTGCACGGTGAAGATATTAGACAAACGGTTCAAGATTGTTATGAGCTGTCAGCTGAGTATGAAGGGGAGCATCGACCTGATAAGTTGGAGGAACTTGGAAATATGTTGACTGGACTTGATGCAGGGGATTCAATTGTCATTGCTAAATCTTTTTCTCACATGCTCAATTTGGCCAACTTGGCAGAAGAAGTTCAAATTGCATACAGAAGAAGGATCAAGTTATTGAAGAAGGGTGACTTTGCTGATGAGAACTCTGCCATGACTGAGTCAGACATTGAAGAAACCTTCAAGAAGCTTGTGTCTCAGCTGAAGAAGACCCCTCAGGAAATATTTGATGCTTTGAAGAACCAAACTGTGGATTTGGTCCTAACTGCTCATCCTACTCAGTCTGTTCGCAGATCTTTGTTGCAAAAGCATGGAAGGATAAGGAATTGTTTGACGCAATTGTATGCTAAAGACATAACACCAGATGATAAGCAGGAACTTGATGAGGCTTTACAAAGAGAGATTCAAGCTGCATTTCGCACAGATGAAATTCGAAGGACTGCTCCTACACCACAAGATGAGATGAGAGCTGGAATGAGCTACTTTCATGAGACAATATGGAAAGGGGTACCAAAGTTTCTACGCCGAGTCGATACAGCACTGAAGAACATGGGAGTAAATGAACGTGTCCCATATAATGCTCCAGTTATTCAGTTCTCTTCTTGGATGGGAGGAGATCGTGATGGTAATCCCAGAGTAACCCCTGAAGTTACAAGGGATGTGTGTTTGCTTGCTAGAATGATGGCTGCTAACATGTACTTCTCTCAGATAGAGGATCTTATGTTCGAGTTGTCTATGTGGCGCTGCAATGACGAGCTCCGTGTTCGTGCTCATGAACTGCATAGGTCCTTAAAGAGAGATGCAAAACATTATATTGAGTTTTGGAAACAGATTCCTCCAAATGAACCTTATCGTGTTATTCTTGGTGATGTCAGAGACAAACTGTACAATACACGCGAACGTGCTCGCCAGTTATTAGCCAATGGGACCTCTGACATCCCTGAAGAAACAACCTTCACTAATGTTGAGCAGTTCCTAGAGCCTCTAGAGCTATGTTACAGGTCTCTTTGTGCATGTGGTGATCGACCAATAGCTGATGGAAGCCTTCTTGATTTCTTGAGGCAAGTTTCTACATTTGGACTTTCACTTGTAAGACTTGACATCCGTCAAGAATCGGATAGGCACACTGATGTTATGGATGCAATTACGAAACACTTGGAGATTGGATCTTATCGTGAATGGTCAGAAGAACGCAGGCAAGAATGGCTCTTGTCTGAGCTAAGTGGAAAGCGCCCCCTCTATGGATCTGATCTTCCAAAAACAGAAGAAATTGCTGATGTTTTGGAAACCTTCCATGTCATTGCAGAACTTCCCTCAGACAACTTTGGTGCTTACATTATCTCAATGGCAACAGCACCATCTGATGTGCTTGCTGTTGAGCTTCTACAACGCGAATGTAATGTGAAGCAGCCATTAAGAGTGGTGCCATTATTTGAAAAGCTTGCTGATCTTGAGGCTGCACCTGCTGCAGTGGCTAGGCTTTTCTCTATAGATTGGTACAGAAACCGGATCAATGGGAAACAAGAAGTTATGATAGGATACTCAGACTCAGGAAAAGATGCAGGCAGGCTTTCGGCGGCTTGGGCGCTTTACAAGGCTCAAGAGGAACTTGTGAAGGTTGCAAAGGAGTTTGGTGTTAAGCTAACAATGTTTCATGGCAGAGGAGGGACTGTTGGAAGAGGAGGAGGTCCTACTCATCTTGCTATTTTGTCTCAGCCACCAGACACTATTCATGGATCACTCCGAGTAACAGTTCAAGGTGAAGTTATTGAGCAGTCCTTTGGAGAGGAGCACTTGTGCTTTAGAACTCTTCAGCGTTTCACAGCTGCTACACTTGAGCATGGCATGCATCCTCCTGTGTCACCAAAACCAGAATGGCGTGCCCTCATGGATGAGATGGCTGCCATTGCAACTAAGGAATATCGCTCTGTTGTTTTCCAAGAGCCTCGCTTTGTTGAGTACTTCAGATGTGCAACTCCTGAGTTAGAGTATGGAAGAATGAACATTGGTAGTCGTCCATCAAAACGGAAACCAAGTGGAGGAATTGAATCACTACGTGCCATTCCTTGGATTTTTGCTTGGACACAAACAAGGTTCCACTTACCAGTATGGCTTGGTTTTGGTAAAGCATTTAAACATGTGGTTGAGAAAGATCCAAAGAATCTCCTAATGCTTCAGGATATGTACAATCAATGGCCTTTCTTTAGGGTCACCCTTGACTTAGTTGAGATGGTGTTTGCCAAGGGAGACCCAGGGATTGCTGCCTTATATGACAAACTCCTAGTATCAGCAGAGCTATGCCCATTTGGAGAGTGCTTAAGAGCTAAATATGAAGAAACCAAGAGCTTTCTCCTCAAGGTTGCTGGGCACAAGGATATTCTAGAAGGAGACCCTTACTTGAAGCAAAGACTTCGTCTTCGTGACTCATACATTACAACCCTGAATGTGTTGCAAGCTTACACATTGAAGCAAATACGTGATCCTGATTACCATGTGAAGTTGAGGCCACACTTGTCAAAGGACTACATGGAATCAAGCAAGCCAGCTGCAGAGCTTGTTAAACTCAACCCAAAAAGCGAGTATGCTCCTGGTCTTGAGGACACCCTTATTTTGACCATGAAGGGTATTGCTGCTGGCATGCAAAATACCGGTTAA 2901 0.4388 MGSRNIEKMASIDAQLRLLAPRKVSDDDKLVEYDALLLDRFLDILQDLHGEDIRQTVQDCYELSAEYEGEHRPDKLEELGNMLTGLDAGDSIVIAKSFSHMLNLANLAEEVQIAYRRRIKLLKKGDFADENSAMTESDIEETFKKLVSQLKKTPQEIFDALKNQTVDLVLTAHPTQSVRRSLLQKHGRIRNCLTQLYAKDITPDDKQELDEALQREIQAAFRTDEIRRTAPTPQDEMRAGMSYFHETIWKGVPKFLRRVDTALKNMGVNERVPYNAPVIQFSSWMGGDRDGNPRVTPEVTRDVCLLARMMAANMYFSQIEDLMFELSMWRCNDELRVRAHELHRSLKRDAKHYIEFWKQIPPNEPYRVILGDVRDKLYNTRERARQLLANGTSDIPEETTFTNVEQFLEPLELCYRSLCACGDRPIADGSLLDFLRQVSTFGLSLVRLDIRQESDRHTDVMDAITKHLEIGSYREWSEERRQEWLLSELSGKRPLYGSDLPKTEEIADVLETFHVIAELPSDNFGAYIISMATAPSDVLAVELLQRECNVKQPLRVVPLFEKLADLEAAPAAVARLFSIDWYRNRINGKQEVMIGYSDSGKDAGRLSAAWALYKAQEELVKVAKEFGVKLTMFHGRGGTVGRGGGPTHLAILSQPPDTIHGSLRVTVQGEVIEQSFGEEHLCFRTLQRFTAATLEHGMHPPVSPKPEWRALMDEMAAIATKEYRSVVFQEPRFVEYFRCATPELEYGRMNIGSRPSKRKPSGGIESLRAIPWIFAWTQTRFHLPVWLGFGKAFKHVVEKDPKNLLMLQDMYNQWPFFRVTLDLVEMVFAKGDPGIAALYDKLLVSAELCPFGECLRAKYEETKSFLLKVAGHKDILEGDPYLKQRLRLRDSYITTLNVLQAYTLKQIRDPDYHVKLRPHLSKDYMESSKPAAELVKLNPKSEYAPGLEDTLILTMKGIAAGMQNTG* 967
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1857 966 Gene3D Phosphoenolpyruvate/pyruvate domain 309 444 - -
Apr2g1857 966 PANTHER PHOSPHOENOLPYRUVATE CARBOXYLASE 1 966 IPR021135 GO:0006099|GO:0008964|GO:0015977
Apr2g1857 966 PRINTS Phosphoenolpyruvate carboxylase signature 168 181 IPR021135 GO:0006099|GO:0008964|GO:0015977
Apr2g1857 966 PRINTS Phosphoenolpyruvate carboxylase signature 221 237 IPR021135 GO:0006099|GO:0008964|GO:0015977
Apr2g1857 966 PRINTS Phosphoenolpyruvate carboxylase signature 281 296 IPR021135 GO:0006099|GO:0008964|GO:0015977
Apr2g1857 966 PRINTS Phosphoenolpyruvate carboxylase signature 441 461 IPR021135 GO:0006099|GO:0008964|GO:0015977
Apr2g1857 966 PRINTS Phosphoenolpyruvate carboxylase signature 590 610 IPR021135 GO:0006099|GO:0008964|GO:0015977
Apr2g1857 966 PRINTS Phosphoenolpyruvate carboxylase signature 632 661 IPR021135 GO:0006099|GO:0008964|GO:0015977
Apr2g1857 966 PRINTS Phosphoenolpyruvate carboxylase signature 764 790 IPR021135 GO:0006099|GO:0008964|GO:0015977
Apr2g1857 966 Pfam Phosphoenolpyruvate carboxylase 36 966 IPR021135 GO:0006099|GO:0008964|GO:0015977
Apr2g1857 966 ProSitePatterns Phosphoenolpyruvate carboxylase active site 2. 592 604 IPR033129 -
Apr2g1857 966 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 33 966 IPR015813 GO:0003824
Apr2g1857 966 ProSitePatterns Phosphoenolpyruvate carboxylase active site 1. 169 180 IPR018129 -
Apr2g1857 966 PANTHER PHOSPHOENOLPYRUVATE CARBOXYLASE 1 966 - -
Apr2g1857 966 Hamap Phosphoenolpyruvate carboxylase [ppc]. 23 966 IPR022805 GO:0006099|GO:0008964|GO:0015977
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1857 Apr-Chr2 24163824 24169775 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1857 2 24163824 24169775 Apr2g1857 2 24163824 24169775 ECH
Apr5g0161 5 1404775 1411841 Apr2g1857 2 24163824 24169775 PCT