Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1782 ATGGATGATGATGTGTTGAACATGCCCAATTGGGGTTACTATGAACCCTTCAGAGGGGGACATCTTGGTCTGCAGCTCATGCCTGGTATGACTGATCGAGACACAAAGTCATTTTTGCCTGGTCGTGATCCAGCTATGTTAATGGGTGCAAATGGAACTTTTCACCCGCGAGATTGTGTTGTTTCCGAAACACCAATTCCAATGAACTATGTCAGAGATAATTGGATAAACCAGAGAGATAGGTTTTTTAATATGCAGCCCACAAATCCTAATTATGCTGTTCTTCCAGAAACATCAGGAGCTCCGTCCTTGCAAATTATACAGCCACCACCGGATACATCGAGAGATGAGAAGGTGGATAGAATTGAAGAACTAGTTGTTAAAAAGGAAGCTGGCCAGTCGAAGAAAAGGCAGGGTAGGGGTGCTCAGACAACGCCAAAAGCTAAGAAACCTAGGAAGCCGAAAGATAGTAGCAATGTTTCTGTTCAACGCGTGAAGCCACCAAAGAAGACAATGGAGCTTGTAATAAATGGAATTGATATGGACATTTCTGGTCTACCCATTCCAGTTTGTTCTTGTACTGGAGCTCCTCAGCAGTGTTATCGTTGGGGCTGTGGTGGTTGGCAATCCGCTTGTTGTACCACAAATGTGTCTATATATCCTTTGCCTATGAGCATGAAAAGGCGCGGTGCAAGGATAGCTGGGCGGAAAATGAGCCAAGGTGCTTTTAAAAAGGTGTTAGAGAAACTTGCAGCTGAAGGTTATAATTTTGCTAACCCTATTGATCTGAAGACTCATTGGGCCAGACATGGCACCAACAAGTTTGTCACTATCAGGTAG 840 0.4417 MDDDVLNMPNWGYYEPFRGGHLGLQLMPGMTDRDTKSFLPGRDPAMLMGANGTFHPRDCVVSETPIPMNYVRDNWINQRDRFFNMQPTNPNYAVLPETSGAPSLQIIQPPPDTSRDEKVDRIEELVVKKEAGQSKKRQGRGAQTTPKAKKPRKPKDSSNVSVQRVKPPKKTMELVINGIDMDISGLPIPVCSCTGAPQQCYRWGCGGWQSACCTTNVSIYPLPMSMKRRGARIAGRKMSQGAFKKVLEKLAAEGYNFANPIDLKTHWARHGTNKFVTIR* 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1782 279 Pfam GAGA binding protein-like family 1 279 IPR010409 -
Apr2g1782 279 SMART GAGA_bind_2 1 279 IPR010409 -
Apr2g1782 279 MobiDBLite consensus disorder prediction 95 166 - -
Apr2g1782 279 MobiDBLite consensus disorder prediction 113 136 - -
Apr2g1782 279 PANTHER PROTEIN BASIC PENTACYSTEINE1-RELATED 1 279 - -
Apr2g1782 279 MobiDBLite consensus disorder prediction 95 110 - -
Apr2g1782 279 PANTHER - 1 279 IPR010409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1782 Apr-Chr2 23463230 23465193 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1782 1 279 BBR or BPC Transcription factor family AT2G01930 58.446 8.63e-110 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Apr2g1782 GAGA_bind 2.9e-108 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1782 2 23463230 23465193 Apr2g1782 2 23463230 23465193 ECH