Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1781 ATGAGGGTATGGGAAAGAGCGAGTGGTGCAATCAAAGACAAAAACAGCATATGGGTTGCAAAGTTATCACGAAAAGGTGCATTTCGCAACCCTGATTTGGAAACGGTGATAATTAAGGCAACAAGCCATGATGAACACCGCATCGATTGCAAGAACGTGCAAAGAGTGTTCCAATGGATACGTACATCACCCATATACCTGAAACCTCTTGCATGGGCTCTCTCCAGGCGCATGCAAAAGACTCGAAGCTGGGTTGTGGCCCTTAAAGGCTTGATGCTCATCCATGGCGTTTATTGCTCTGACCTTCCCGGGGTTCAATACATGGATAGGTTACCCTTTGACCTATCCAACTTCTCTGATGGCCATTTGAGCCCTTCAAAGGCTTGGGGCTTCAGCTCCTTCATTCGTGCTTATTTTGCGTATTTAGACCAAAGATTATCGTTTGTGTCCTCCGAGTTTAAGAAGAAGAATAATAACAAGGACGTGGAGGTTGAGGAGATGTTGATGGAAGAGCTTCAGAAGTTGCAAAAGTTACAGGGAATGATTGGCATGCTTATGGAGATCAGGCCCAAGCATGTTGACATGAATAATGTTCTTATTCTTGAAGCAATGGATTGTGTTATAGTTGAGGTTTTTGATGTGTATAGTAAGTTTTGCAACAAGATTGCAAAGGTGCTGTTGAGGATATATGAGATGGGCGGGAAGGTGGAAGCAAGTATTGGCCTTAAGGTTCTTCAGAAAGCATCGATTCAAAGGGAAGAGCTCTGTTTGTTCTTTGACTTTTGTAGGGATATTGGTGTTCTCAATGCTTCTCAGTACCCCAAGATTGAGAGAATTTCTGAAGAAGTTATTAGAGATCTTGAGAGGATAATCAGTGGTACCTCTGCCAAGAAAAGCTTGGAGGGTAATGAGGGTAGTTGTGGTGTTGTAAATGACAAGGACAAGGCCATTGTGATGAAAGATTGTTCTGCCACTGCAACCGTTTCGCATAAGAAGGATTCAGAGAATGGCCTGACGACAGTGATCACTCACCAATGGGAAGTGTTTGATGATGATATAATGATGGTTGATGCTAAAAGAACATATTATGTGTCCAATGGTTCAAGGATTATTGGCAGCACAACCAACCCTTTTGAGGAATCATATAGCATTGTACCTTATCATCCTGTTCAAAATCAAGCTCTTCCTGATCTAATTAGTTTGTAG 1206 0.4237 MRVWERASGAIKDKNSIWVAKLSRKGAFRNPDLETVIIKATSHDEHRIDCKNVQRVFQWIRTSPIYLKPLAWALSRRMQKTRSWVVALKGLMLIHGVYCSDLPGVQYMDRLPFDLSNFSDGHLSPSKAWGFSSFIRAYFAYLDQRLSFVSSEFKKKNNNKDVEVEEMLMEELQKLQKLQGMIGMLMEIRPKHVDMNNVLILEAMDCVIVEVFDVYSKFCNKIAKVLLRIYEMGGKVEASIGLKVLQKASIQREELCLFFDFCRDIGVLNASQYPKIERISEEVIRDLERIISGTSAKKSLEGNEGSCGVVNDKDKAIVMKDCSATATVSHKKDSENGLTTVITHQWEVFDDDIMMVDAKRTYYVSNGSRIIGSTTNPFEESYSIVPYHPVQNQALPDLISL* 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1781 401 SMART enth_2 31 158 IPR013809 -
Apr2g1781 401 CDD ANTH_N_AP180_plant 33 148 - -
Apr2g1781 401 Gene3D - 4 153 IPR008942 -
Apr2g1781 401 PANTHER OS08G0467300 PROTEIN 1 399 - -
Apr2g1781 401 SUPERFAMILY GAT-like domain 170 292 - -
Apr2g1781 401 PANTHER CLATHRIN ASSEMBLY PROTEIN 1 399 IPR045192 GO:0048268|GO:0072583
Apr2g1781 401 Pfam ANTH domain 32 291 IPR011417 GO:0005543
Apr2g1781 401 ProSiteProfiles ENTH domain profile. 25 156 IPR013809 -
Apr2g1781 401 Gene3D ANTH domain 154 304 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
Apr2g1781 401 SUPERFAMILY ENTH/VHS domain 32 149 IPR008942 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1781 Apr-Chr2 23454384 23458599 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1781 2 23454384 23458599 Apr2g1781 2 23454384 23458599 ECH