Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1764 ATGGGAGGGTCTCACATGGGGTTCTTCTTGTTTTGCTCTCTGCTTTTTGTTTTGGCTTCTGCCTCATCCACAAACTTGCCCATCATACCCTTTGATGAAGGCTACACACCCTTATTTGGGGACAGTAACTTGGTCATCCACAGGGATGGAAAATCAGTTCATCTTTCACTGGATGAGAGAACAGGTTTTTTGTTTTTACTTTCATTTACGTTTAAAAATTTGTGTGGGGGTTCTGTGGAGATGGTGATTTTCTGGCTAAAGCCTTCACCTTTTTGGTCTTTCCATTTCTGGGTTGTCTTTGCAGGTTCCGGATTTGTGTCTCATGATCTTTACCTTCACGGGTATTTCAGTGCTTCGATTAAGTTGCCTGCTGATTACACTGCAGGAGTTGTGGTTGCCTTCTATATGTCAAATGGTGACATGTTCCGGAATAACCATGATGAAATCGACTTTGAGTTTTTGGGAAACATTAGAGGTAGAGACTGGAGGATTCAGACCAATGTTTATGGCAATGGTAGCACCAGCATTGGTAGAGAGGAAAGATACGGTCTCTGGTTTGATCCAGCAGAGGATTTCCATCAGTACAGTATTCTCTGGACAGATTCTCAGATCATATTTTATGTAGATAATATTCCTATTAGAGAAGTTACTCGAACTGAATCAATGGGAGGAGATTTTCCTTCTAAGCCAATGACTTTGTATGCAACAATATGGGATGCATCTGATTGGGCTACCAACGGAGGCAAATACAGAGTGAATTACAAGTATGCACCCTATGTTGCTGAATTCTCAGACCTTGTTCTGCATGGCTGTGCAATTGATCCTATTGAAAATGTGGCCAAGTGTGACAATACTCAAAGTTCTGAAGCAATTCTTTCTGGTATTACACCAGTACAAAGAATCAAAATGGAGAACTTCAGGAAGAAGCACATGACATACTCCTACTGCTATGACAAAGTCAGATACAAAGTCCCTCCATCTGAATGTGTGATCAATTCCCGAGAAGCTGATAGACTAAGAAAGTTTGATCCTGTCACATTCGGTAGCGGCCGGCGGCACCATGGAAAACGACACCCTCACAACAGAGGAAGCCAGATGGAAGCTGCTTCATTTTAA 1116 0.4211 MGGSHMGFFLFCSLLFVLASASSTNLPIIPFDEGYTPLFGDSNLVIHRDGKSVHLSLDERTGFLFLLSFTFKNLCGGSVEMVIFWLKPSPFWSFHFWVVFAGSGFVSHDLYLHGYFSASIKLPADYTAGVVVAFYMSNGDMFRNNHDEIDFEFLGNIRGRDWRIQTNVYGNGSTSIGREERYGLWFDPAEDFHQYSILWTDSQIIFYVDNIPIREVTRTESMGGDFPSKPMTLYATIWDASDWATNGGKYRVNYKYAPYVAEFSDLVLHGCAIDPIENVAKCDNTQSSEAILSGITPVQRIKMENFRKKHMTYSYCYDKVRYKVPPSECVINSREADRLRKFDPVTFGSGRRHHGKRHPHNRGSQMEAASF* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1764 371 MobiDBLite consensus disorder prediction 343 371 - -
Apr2g1764 371 SUPERFAMILY Concanavalin A-like lectins/glucanases 31 332 IPR013320 -
Apr2g1764 371 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 27-RELATED 101 350 - -
Apr2g1764 371 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 27-RELATED 7 65 - -
Apr2g1764 371 Pfam Glycosyl hydrolases family 16 35 255 IPR000757 GO:0004553|GO:0005975
Apr2g1764 371 Pfam Xyloglucan endo-transglycosylase (XET) C-terminus 293 329 IPR010713 GO:0005618|GO:0006073|GO:0016762|GO:0048046
Apr2g1764 371 CDD GH16_XET 29 329 IPR016455 GO:0010411|GO:0016762|GO:0042546
Apr2g1764 371 Gene3D - 17 329 - -
Apr2g1764 371 ProSiteProfiles Glycosyl hydrolases family 16 (GH16) domain profile. 21 263 IPR000757 GO:0004553|GO:0005975
Apr2g1764 371 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 7 65 IPR044791 GO:0004553
Apr2g1764 371 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 101 350 IPR044791 GO:0004553
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1764 Apr-Chr2 23293189 23295811 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1764 8 365 Glycoside Hydrolase AT1G14720 61.389 1.70e-158 446
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1764 2 23293189 23295811 Apr2g1764 2 23293189 23295811 ECH