Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1762 ATGATTGCAAGTAAAGATCTTCGGAGTGGTGCTGTTGACTCTGAGGGTGAGAACTCCAGGAGCAAGTTTTCAAGGCAAAATTTTGAGGCTGCACCAGATGATAAAGGTGTTGAATTTCTGAGAGATTCTGAGGTGGGTGGTGATGTTGATGGGGTTCTTCACTCCAACCCCACCAAGGGTATTGGCAGCTCAACGTTGCAAGAGCTTACCCTGAGCTACCTCTGTGATAACCCAAAATTGGGTCTTGCTGAGAGAGAGATTCCTGGGAAAAGCTTGCTGAATTCTTTTGAAAAAATGAGCCACAAAGGGAAAGAGGTTGTGGTTTCCGAGAATTCAAATCAAGATGGAAAATGGGTGGAAAGAGATTTCCTTAGCCTGAGTGAACCAAGAGAGGATTCTTCAAAGCGATCCCTTGAAGAAGAAGGGGTTGAAAGAGAGAGTAATAGGGACAAGAAGCCAAAACTTGAGACGCTTAATCTCTCTCTTGCTTTGCCTGATGTGTCACTTTCTCTCACAGCTTCAAACGCCTTACAGAATGGTGATCAACCAGTTAGGACTAAGCCTAGCAGGCCTTCAACTACTTCTTATTCAAATGATTACACTGCAGCTTCTTTGTCTTACTCTTATTCCCACCCTTTCTCCCACAACCCAAGTTGTTCACTCACTCGCAATTCAACTGATAATTTTGAGTATTCATTGAGCAAAGATGACCAGATTTGGAATTGTGGGGAAGGGACTAATGGGTCTGTGCATAGTAGGTTCAAGCCTATTGGAGACGGGGTTGCTTTGTCCAATCATGGCGCTGGTCTTAGCTCCTTTATGCAAGGTAATAGTCAGTATAAAACTACTAGTTCAGATAATCATTCTTTTTTCCCTTCAGAATTACCTGCTAGACCAAGGTTTGAGGCTCAATCAGGAGGGGACTCCAGGGGAAGGAATTCTGAGAATCTGAGACTCTTGGAAGGCTTAGATGATGGGAAGATAAGAAAGCTTTCAAGGCCTGAGAGAATTGTCAGGGAAATTGTGTCAGAGTCTGTTCCTGTCATGGCATTGACAATTCAGGAGCTAGCTGATGAAGTCATAGTATCAACTAAGGAATACTTGAAGAATCTCATTGAGAAGGCTGAGAAGAAAGAGGAATTGGCAAGCCTTCAAAACCGGCTTGAGAGAAGATCTGATCTTAACAAGGAGACTCTTGCAAAGTGCCATAAAGTGCAATTAGAGATTTTAGTGGCTGTCAAGATGGGGCTTGCTAGCTTCTTATCTAACAAAGTTCACTTATCTGAGTTAGTAGAGATTTTTTTGTACAAGAGGTGTAGAAATGTGACCTGCAAGCATGTGCTTCCTGTTGATGATTGTGATTGCAAGATTTGCTCAGGAAATAAGGGCTTTTGCAGTTCTTGCATGTGCCCTGTATGCTTGAACTTTGATTGTGCTAATAACACTTGTAGTTGGATAGGATGTGATGTTTGTTCACATTGGTGCCATGCTACCTGTGGCATTCAGAGGAATCTCATCAAGCCTGGGCCTAGCTTGAAGGGTCCTTCAGGAACCTCAGAGATGCAGTTTCATTGTATTGGCTGTGGACACGCCTCTGAAATGTTTGGTTTCGTTAAAGATGTGTTTATTTGTTGCGCGAAGGATTGGGGCCTTGAAACCTTGATGAAGGAGCTTGACTGTGTAAGGAGGATTTTCAGGGAAAGTGAAGATCGCAAAGGGAAGGAATTGCATTTTAAAACTAATGACATGCTATTAAAGCTTCAAACCAAAATGATATCTCCTTTGGATGCCTGCAATTACATCATACAATTTTTCAGCTATGCGGATAGCATGTCAGACTTTCCTGCTTCTGGTATTTCTTCAAAGGATATGGCAGCCTCTCAAGCTAAGCTTACAAAGGATACACCTTCTCATTCGAAACCCACTTCTCTATTACCAAAATATGCTTATGACTTGAGCTATTCTAGGTCACATTCTGATGCCATGTCAAATGATCTCCTTCAGAAAGACCTCAAAGCTTCCATCTTGAGTGAACTGAAAAACGAGTCTGATTTTCATTTGGGGGCTTTGTTAAGGAAAGGTGGACTCGAAAGCTTGGAGAGCATTGTGCGAATAAAGGAGGCAGAAGCCAGAATGTTCCAAACGAAGGCGGATGAAGCGAGAAGAGAGGCAGAGGGGTTCCAGAGGATGATCAGGACGAAGACTGCTCAGATGGAAGAAGAGTATGCTGAAAAGCTTGCCAAACTCTGTTTGCACGAGACCGAGGAAACGCAGAGGAAGAAACAGGATGAACTGAAGGTGTTGGAAAATTCATATTTTGATTACTACAAAATGAAAAAGAGAATGCAAGATGAAATTGATGGTTTATTGCGGAGAATGGAGGCAACAAAGCAGCAATGGGTTTAA 2406 0.4264 MIASKDLRSGAVDSEGENSRSKFSRQNFEAAPDDKGVEFLRDSEVGGDVDGVLHSNPTKGIGSSTLQELTLSYLCDNPKLGLAEREIPGKSLLNSFEKMSHKGKEVVVSENSNQDGKWVERDFLSLSEPREDSSKRSLEEEGVERESNRDKKPKLETLNLSLALPDVSLSLTASNALQNGDQPVRTKPSRPSTTSYSNDYTAASLSYSYSHPFSHNPSCSLTRNSTDNFEYSLSKDDQIWNCGEGTNGSVHSRFKPIGDGVALSNHGAGLSSFMQGNSQYKTTSSDNHSFFPSELPARPRFEAQSGGDSRGRNSENLRLLEGLDDGKIRKLSRPERIVREIVSESVPVMALTIQELADEVIVSTKEYLKNLIEKAEKKEELASLQNRLERRSDLNKETLAKCHKVQLEILVAVKMGLASFLSNKVHLSELVEIFLYKRCRNVTCKHVLPVDDCDCKICSGNKGFCSSCMCPVCLNFDCANNTCSWIGCDVCSHWCHATCGIQRNLIKPGPSLKGPSGTSEMQFHCIGCGHASEMFGFVKDVFICCAKDWGLETLMKELDCVRRIFRESEDRKGKELHFKTNDMLLKLQTKMISPLDACNYIIQFFSYADSMSDFPASGISSKDMAASQAKLTKDTPSHSKPTSLLPKYAYDLSYSRSHSDAMSNDLLQKDLKASILSELKNESDFHLGALLRKGGLESLESIVRIKEAEARMFQTKADEARREAEGFQRMIRTKTAQMEEEYAEKLAKLCLHETEETQRKKQDELKVLENSYFDYYKMKKRMQDEIDGLLRRMEATKQQWV* 802
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1762 801 Coils Coil 703 737 - -
Apr2g1762 801 Coils Coil 374 394 - -
Apr2g1762 801 PANTHER PROTEIN OBERON 3 1 801 - -
Apr2g1762 801 Pfam PHD - plant homeodomain finger protein 439 563 IPR032881 -
Apr2g1762 801 PANTHER VERNALIZATION-INSENSITIVE PROTEIN 3 1 801 IPR004082 -
Apr2g1762 801 MobiDBLite consensus disorder prediction 174 197 - -
Apr2g1762 801 MobiDBLite consensus disorder prediction 10 36 - -
Apr2g1762 801 MobiDBLite consensus disorder prediction 279 317 - -
Apr2g1762 801 CDD PHD_OBE1_like 469 528 - -
Apr2g1762 801 Coils Coil 751 771 - -
Apr2g1762 801 Coils Coil 779 799 - -
Apr2g1762 801 MobiDBLite consensus disorder prediction 129 154 - -
Apr2g1762 801 MobiDBLite consensus disorder prediction 1 36 - -
Apr2g1762 801 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 352 374 IPR004082 -
Apr2g1762 801 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 391 406 IPR004082 -
Apr2g1762 801 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 430 451 IPR004082 -
Apr2g1762 801 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 476 496 IPR004082 -
Apr2g1762 801 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 549 568 IPR004082 -
Apr2g1762 801 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 697 717 IPR004082 -
Apr2g1762 801 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 736 758 IPR004082 -
Apr2g1762 801 Pfam Coiled-coil region of Oberon 661 790 IPR032535 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1762 Apr-Chr2 23271055 23275183 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1762 439 536 PHD Gene Family AT5G57380 28.571 6.75e-08 54.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1762 2 23271055 23275183 Apr2g1762 2 23271055 23275183 ECH