Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1761 ATGATGACTCCAAACTTGAACTTGGAACCTGAAAACCATTCAGAAGGAACCAGCCAAGTGGCTTCCCCTGATCTTACCAAGGGTAGCACCACCACTTCTTCCTCTCTTTCAAAGGATGAAGCTGATCCAGCTCCTGTTACCCTTGACTTGACACTTAACCTCAATTCAAATAGTGATTGTGAGTTGAAAGGTTCAAGTGATGCTAGCAGTGAAGTAGGAGCTGAAGTTCATGCTTCAGCATCAGCAACTCCCAGGGTTTTCTCTTGTAATTACTGCAGGAGGAAATTCTATAGCTCACAGGCATTAGGGGGTCATCAAAATGCTCACAAAAGGGAGAGGACAATGGCTAAGCGCGCAATGCGAATGGGAATGTTCACGGAGAGGTATACAAGCTTGGCATCTCTACCTCTTCATGGTTCACCTTTTCGGTCTCTTGGTCTCGAAGCTCACGCCGCGATGCACCGAAGACAAGTGCCATCCTCATTGATGGTTCCTGATATGAAAGCTGGTGCAAAATTTGAGAAAAATAATTTTGGATCACTAGTTTTCATGGATGATGATGATGTTGGATTCTTTTGGCCTGGTAGTTTCAGACAGGTAGATCAAGGAGCTGGTGTTAATCTAGGACATGCTCAAAGTTCTAATGCTAGTTTAGTTCCAATGCCACCCCCTTCACCGCAAGCTTCTACATCTCCTGATCTCACACTGAAGCTTTAA 717 0.4477 MMTPNLNLEPENHSEGTSQVASPDLTKGSTTTSSSLSKDEADPAPVTLDLTLNLNSNSDCELKGSSDASSEVGAEVHASASATPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRAMRMGMFTERYTSLASLPLHGSPFRSLGLEAHAAMHRRQVPSSLMVPDMKAGAKFEKNNFGSLVFMDDDDVGFFWPGSFRQVDQGAGVNLGHAQSSNASLVPMPPPSPQASTSPDLTLKL* 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1761 238 MobiDBLite consensus disorder prediction 1 40 - -
Apr2g1761 238 ProSiteProfiles Zinc finger C2H2 type domain profile. 87 114 IPR013087 -
Apr2g1761 238 ProSitePatterns Zinc finger C2H2 type domain signature. 89 109 IPR013087 -
Apr2g1761 238 PANTHER ZINC FINGER PROTEIN JAGGED 7 238 IPR045320 GO:0003700
Apr2g1761 238 SUPERFAMILY beta-beta-alpha zinc fingers 85 115 IPR036236 -
Apr2g1761 238 PANTHER ZINC FINGER PROTEIN 3-RELATED 7 238 - -
Apr2g1761 238 Gene3D Classic Zinc Finger 63 133 - -
Apr2g1761 238 MobiDBLite consensus disorder prediction 1 44 - -
Apr2g1761 238 MobiDBLite consensus disorder prediction 213 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1761 Apr-Chr2 23260902 23266865 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1761 81 238 C2H2 Transcription Factor Family AT1G66140 44.086 3.15e-41 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Apr2g1761 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1761 2 23260902 23266865 Apr2g1761 2 23260902 23266865 ECH