Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1524 ATGGTGAAACCAGAACTGGGTTTTGGAGGTTCTTTCATTTCTTGTCTTGTGTTGTTGGTTCTTGTTGTTTTGGTTGTCCCAGCTAGGTGTCAAGATGCAGAGGTAATGGGAATTCTCAAGGTCATGATCAATGCCCCCATTAGCTTCCAATGGACAGACCCTGATGTATGCAAATGGAAGCATGTTGAATGTGATTCAACCAAACATGTTACAGCTATTCAGATTGGGAACCAGCACCTTCAGGGTTCTCTCCCAAAGGAACTTCAGAGGCTAACAAGGTTGCAACGTTTTGAGTGTCAAAGCAACAGTTTCACAGGACCATTCCCTTACCTCTCAAAATCCTTGCAAAGGTTGATGATCCATAACAACAAGTTCAACTTCATTGCCAATGATTTCTTCACAGGAATGAGCAGTTTGCAAGATGTGAGAATGGACAACAACCCTTTTTCTCAATGGCATATTCCTGACACTCTGAAGGATTGTGTTGCACTCCAGACTTTCAGTGCTGAGGATGTTGGCTTGATTGGGACAATCCCAGATTTCTTTGGCAAAGATGGTCCTTTCCCAGGTTTGGTTTTCTTGGACTTGTCTGATAATTTTCTAGAAGGTCCCTTACCTTCAAGCCTCTCGGGTAGTTCAATAGAGAACCTTTTGGTGAATGGACAGAATGGAAACTCTAAACTCAATGGCACCCTTGCTGTGTTACATAACATGACATCTTTGAAGCAAATTTGGGCTCATGGTAATTCGTTCACTGGTTCTATTCCAGACTTGTCGCACCATGATCAACTATTTGATGTGAATGTAAGGGATAACCAGTTAACTGGTGTTGTTCCACCCTCCCTAATTTCTCTTCAAAGTTTGCAAGTTGTGAACTTGACCAATAATCTTCTTCAAGGACCCCCTCCAAAGTTCAGAGATGGGGTAGGAGTTGACAATAATATGGACAAGGGGAGGAATCAATATTGCACAAATGTGCCGGGGCAGCCATGTAGTCCTCTTGTGAATGCTTTGTTATCTGTTGTTGAGCCTTTGGGTTATCCTATCAAGTTTGCTCAAAACTGGAAGGGTAATGATCCATGTGCTAATAACTGGATAGGGATAGTTTGCTCCAATGGAAACATTTCTGTTATCAATTTTCAGAACATGGGTTTGTCTGGCACTATTTCTCCTAGTTTTGCTACCCTTACATCTGTCACAAAATTGCTTCTTGCTAACAATGGTCTCACTGGTACCATACCAATGGAACTTACTAGTATGCCTCTTTTGCGAGAGTTAGATGTTTCCAGTAATCATTTGTTTGGAAAATTACCACCATTCCATAGAGATGTGGTTCTTAAAGTAGGTGGAAATCCTGATATTGGAGAGGATAAGCCTACTAATTCTCCAACGGCCTCAAGTTCAGGAGGTAATGGTAATAAACATAACATTGGCGTCATTGTTGGAATTGTGGTGGCGGTGGTTGTTTTACTTGCTGCTGGGGTTCTAATATTTGTTAAGTTTAGGAGAAAGTTGAAGCGTGAGAAGAAAGTTCAAAATCCAAATGCAATTGTGGTACATCCTCGCCATTATGGTGATGGAAATGCTACAAAGACAAGTGTTGCAGGTTATGGTGAAGGAACAGCTGGTACAGTATTAAGTCCCATGTCTAATGCTTATCAAGTGGAAGCTGGTAATATGCTAATTTCAATTGAAGTCTTGAGAGAAGTTACCAACAATTTCTGTGAAAAAAACATATTGGGAAAGGGGGGTTTTGGCTCTGTATACAGAGGAGAATTGCATGATGGGACAAAGATTGCAGTGAAAAGGATGCAAGCAGGATTGGTGGATGAGAAAGGGTTGAGTGAGTTCATGGCTGAAATTACAGTGCTTACTAAGGTTCGGCACAAGCATTTGGTTGCACTCTTGGGGTATTGTTTGGATGGAAGTGAGAGACTTCTTGTCTATGAGTACATGCCTCAGGGTGCTCTTAGTAAACACCTGTTTAATTGGAGAGGTGAAGGACTAAAACCACTAGAATGGAAGACAAGGCTTAGTATTGCATTGGATGTTGCTAGAGGGGTTGAATATCTTCATGGTTTGACACAACAGATTTTTATCCACAGGGATCTCAAACCATCTAACATTTTGCTAGGAGAGGATAAGCGTGCCAAAGTATCAGATTTTGGATTAGTTCGCCTTGCTCCCGAAGGGAAAACCTCATTTCAAACTAGGCTTGCTGGAACTTTTGGATATATGGCACCAGAGTATGCAGCCACTGGCAGACTTACAACAAAGGTTGATGTATATAGTTTTGGTGTGATTCTCATGGAGATTATAACTGGAAGGAAAGCACTTGATGACAGCCTACCAGAAGAAAACATCCACCTTGTTCCATGGTTTCGCAAGATGCTGCTGAACAAAGACTCATTTCGAACAATCATCGATCCAACAATTCAAGTTGATGAGGAAACCTTAGCCAGTGTTAGCACTGTTGCAGAGTTAGCAGGGCACTGCAGTGCAAGAGAGCCTTATCAACGCCCTGACATGAGTCATGCAGTGAATGTACTATCACCCCTTGTTGAGGTGTGGAAGCCTTCACAACCAGATGTTGATGACATATATGGGATTGACTTTGATATGACATTACCTGAAGCACTCCAAAGGTGGCAAGCTTATGAAGGAAGAAGCACCATGGATTTAACAGCTCCTTCATCTGTCCATCCTAGTGGAAACAACTCAAAGTCAAACATACAAACTAGACCATTTTTAGATGGGCAATGA 2763 0.418 MVKPELGFGGSFISCLVLLVLVVLVVPARCQDAEVMGILKVMINAPISFQWTDPDVCKWKHVECDSTKHVTAIQIGNQHLQGSLPKELQRLTRLQRFECQSNSFTGPFPYLSKSLQRLMIHNNKFNFIANDFFTGMSSLQDVRMDNNPFSQWHIPDTLKDCVALQTFSAEDVGLIGTIPDFFGKDGPFPGLVFLDLSDNFLEGPLPSSLSGSSIENLLVNGQNGNSKLNGTLAVLHNMTSLKQIWAHGNSFTGSIPDLSHHDQLFDVNVRDNQLTGVVPPSLISLQSLQVVNLTNNLLQGPPPKFRDGVGVDNNMDKGRNQYCTNVPGQPCSPLVNALLSVVEPLGYPIKFAQNWKGNDPCANNWIGIVCSNGNISVINFQNMGLSGTISPSFATLTSVTKLLLANNGLTGTIPMELTSMPLLRELDVSSNHLFGKLPPFHRDVVLKVGGNPDIGEDKPTNSPTASSSGGNGNKHNIGVIVGIVVAVVVLLAAGVLIFVKFRRKLKREKKVQNPNAIVVHPRHYGDGNATKTSVAGYGEGTAGTVLSPMSNAYQVEAGNMLISIEVLREVTNNFCEKNILGKGGFGSVYRGELHDGTKIAVKRMQAGLVDEKGLSEFMAEITVLTKVRHKHLVALLGYCLDGSERLLVYEYMPQGALSKHLFNWRGEGLKPLEWKTRLSIALDVARGVEYLHGLTQQIFIHRDLKPSNILLGEDKRAKVSDFGLVRLAPEGKTSFQTRLAGTFGYMAPEYAATGRLTTKVDVYSFGVILMEIITGRKALDDSLPEENIHLVPWFRKMLLNKDSFRTIIDPTIQVDEETLASVSTVAELAGHCSAREPYQRPDMSHAVNVLSPLVEVWKPSQPDVDDIYGIDFDMTLPEALQRWQAYEGRSTMDLTAPSSVHPSGNNSKSNIQTRPFLDGQ* 921
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1524 920 Pfam Protein tyrosine and serine/threonine kinase 577 849 IPR001245 GO:0004672|GO:0006468
Apr2g1524 920 ProSiteProfiles Protein kinase domain profile. 574 854 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g1524 920 PANTHER OSJNBA0070M12.3 PROTEIN 14 915 - -
Apr2g1524 920 Gene3D Phosphorylase Kinase; domain 1 543 651 - -
Apr2g1524 920 PANTHER TRANSFERASE, PROTEIN KINASE RLK-PELLE-LRR-IX FAMILY-RELATED 14 915 - -
Apr2g1524 920 SMART serkin_6 574 854 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g1524 920 ProSitePatterns Protein kinases ATP-binding region signature. 580 602 IPR017441 GO:0005524
Apr2g1524 920 Gene3D Transferase(Phosphotransferase) domain 1 652 866 - -
Apr2g1524 920 SUPERFAMILY L domain-like 34 305 - -
Apr2g1524 920 SUPERFAMILY Protein kinase-like (PK-like) 553 850 IPR011009 -
Apr2g1524 920 CDD STKc_IRAK 580 853 - -
Apr2g1524 920 MobiDBLite consensus disorder prediction 451 471 - -
Apr2g1524 920 MobiDBLite consensus disorder prediction 894 920 - -
Apr2g1524 920 Gene3D Ribonuclease Inhibitor 31 329 IPR032675 -
Apr2g1524 920 Gene3D Ribonuclease Inhibitor 334 458 IPR032675 -
Apr2g1524 920 Pfam Leucine rich repeat N-terminal domain 44 65 IPR013210 -
Apr2g1524 920 Pfam Leucine rich repeat N-terminal domain 337 371 IPR013210 -
Apr2g1524 920 MobiDBLite consensus disorder prediction 457 471 - -
Apr2g1524 920 ProSitePatterns Serine/Threonine protein kinases active-site signature. 699 711 IPR008271 GO:0004672|GO:0006468
Apr2g1524 920 SUPERFAMILY L domain-like 335 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1524 Apr-Chr2 21150723 21154438 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1524 70 856 Receptor kinase-like Gene Family AT5G07280 31.340 1.53e-79 279
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Apr2g1524 PK_Tyr_Ser-Thr 1.6e-48 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1524 2 21150723 21154438 Apr2g1524 2 21150723 21154438 ECH