Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1504 ATGTTAGTGTTGCCCACGTTGACTCCATTCTTCTTTCATGTCACCCTTCACTTCCCACTGAAACTACGAAAATGCCACTCGTCTCTCTATTCAAATCCACGTTCGCAATTTGTGCTTGGAATCGGGGCATTTCTGTCACAACACTCCAACATCCTTATTATTGTCAGAGAAGAGAAGTGGGTTGTGCGGAAAGACAGAATTGGTTTTACAGTTGAAGAAAACATCATGGCTATGGCAAAAGAGAAAGAGGAAGATGAGGAAGAGGTTCAGAATTGTGGGAAGAGACTCAAGTGTATGAGGAATGAAGACGACGACCAAGTTATAGCCGAAGATGAAGAGGAAAGTGAGCTTCCCCTTCAGCCTGGGCTTTTCTTCTACCCAACAACACCTACCTCTTTTGTTGTTTCTGATGCACTTGAACCTGATTTCCCAATCATATATGTCAACAAGGTCTTCGAAATCTCCACTGGGTATCGTGCTGATGAGGCCCTTGGTCGCAACTGCCGATTCTTACAGTACAGAGATCCTCGAGCTCAAAGGAGACACCCTTTGGTAGATCCTGTTGTTGTGTCTGAGATTAGAAGATGTCTTGAGGAAGGTGTTGAGTTCCAAGGTGAACTTCTGAACTTCAGAAAAGACGGTACTCCTTTAGTGAATAGGCTGAGACTTGCACCAATTCATGATGACGATGGGACCGTGACACACATAATAGGTATCCAACTCTTTTCTGAGGCAAATATAGATCTGAACCGTGTCTCATATCCAGTTTTCAAAGAGACCTGCAATCAAGATTTTGATAAAAGTGGTCAATATTCTCCTAAGAGTGGACAATCACTGTACAGTCAGCACCAAGAGATGTGTGGCATTCTTCAACTTTCTGATGAAGTCTTGGCTCACAACATTTTGTCACGCTTGACACCAAGAGATGTTGCATCCATTGGATCTGTATGCAGGAGAATCCGTCAATTAACCAAGAATGAGCATGTGAGGAAGATGGTATGTCAAAATTCATGGGGCAAAGAAGTGACAGGCACATTGGAACTGATGACCAAGAAGTTAGGATGGGGTCGTCTTACTCGCGAACTTACAACTCTCGAGGCTGTTTGTTGGAGAAAACTGACAGTTGGAGGTGCAGTGGAGCCTTCACGCTGCAACTTCAGTGCTTGTGCTGCAGGAAACCGACTTGTATTGTTTGGTGGTGAAGGTGTGGATATGCAACCTATGGATGACACATTTGTTCTAAACCTTGATGCTAAAAATCCAGAATGGCGCAGGGTTAGTGTGAAATCATCTCCACCTGGAAGGTGGGGCCACACGCTCTCGTGCTTAAATGGTTCTTGGTTGGTGGTTTTTGGTGGGTGTGGTAGGCAAGGATTGCTCAATGATGTGTTTGTGCTTGATTTGGATGCTCAACAGCCAACATGGAAGGAAGTCTGCGGCGGAACCCCTCCACTTCCCAGATCATGGCACAGCTCTTGCACCATTGAAGGGTCCAAATTGGTTGTCTCCGGCGGGTGCACAGATGCCGGCGTACTTCTTAGTGACACATATTTACTGGACCTCACAACAGATAATCCAACATGGAGAGAAATTCCAACTTCATGGGCACCTCCATCTCGGTTGGGGCACTCACTCTCAGTCTATGGGAGGACAAAGATTGTCATGTTTGGGGGACTTGCCAAGAGTGGACACTTGCGGCTTCGATCAGGCGAGGCTTATACAATTGATTTAGAAAATGAACAACCGCAATGGAGGCAGCTAGAATACAGTGCATTCACGGGATTAGCAAGTCAAAGTGCTGTTGTTCCTCCTCCTAGGTTGGATCATGTTGCTGTCAGCATGCCTTGTGGGAGGATTATCATATTTGGAGGTTCAATTGCTGGTCTTCACTCACCATCTCAGCTCTTTCTATTGGACCCTTCTGAAGAGAAACCGTCTTGGAGGATCCTGAATGTTCCAGGGCAACCACCTAAATTTGCATGGGGTCATAGCACTTGTGTTGTTGGAGGGACAAGGGTGTTGGTGTTGGGTGGACACACTGGGGAGGAATGGATATTGAACGAGTTGCATGAGTTGTGCTTGGCAAGTCGACAAGATTCTGAGCTGTGA 2109 0.4599 MLVLPTLTPFFFHVTLHFPLKLRKCHSSLYSNPRSQFVLGIGAFLSQHSNILIIVREEKWVVRKDRIGFTVEENIMAMAKEKEEDEEEVQNCGKRLKCMRNEDDDQVIAEDEEESELPLQPGLFFYPTTPTSFVVSDALEPDFPIIYVNKVFEISTGYRADEALGRNCRFLQYRDPRAQRRHPLVDPVVVSEIRRCLEEGVEFQGELLNFRKDGTPLVNRLRLAPIHDDDGTVTHIIGIQLFSEANIDLNRVSYPVFKETCNQDFDKSGQYSPKSGQSLYSQHQEMCGILQLSDEVLAHNILSRLTPRDVASIGSVCRRIRQLTKNEHVRKMVCQNSWGKEVTGTLELMTKKLGWGRLTRELTTLEAVCWRKLTVGGAVEPSRCNFSACAAGNRLVLFGGEGVDMQPMDDTFVLNLDAKNPEWRRVSVKSSPPGRWGHTLSCLNGSWLVVFGGCGRQGLLNDVFVLDLDAQQPTWKEVCGGTPPLPRSWHSSCTIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDNPTWREIPTSWAPPSRLGHSLSVYGRTKIVMFGGLAKSGHLRLRSGEAYTIDLENEQPQWRQLEYSAFTGLASQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWILNELHELCLASRQDSEL* 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1504 702 Pfam Galactose oxidase, central domain 448 495 - -
Apr2g1504 702 Pfam Galactose oxidase, central domain 497 548 - -
Apr2g1504 702 PANTHER BACTERIOOPSIN TRANSCRIPTIONAL ACTIVATOR 86 699 - -
Apr2g1504 702 Pfam PAS domain 139 239 IPR000014 -
Apr2g1504 702 Pfam Galactose oxidase, central domain 383 433 - -
Apr2g1504 702 SUPERFAMILY F-box domain 283 357 IPR036047 GO:0005515
Apr2g1504 702 Gene3D - 565 697 IPR015915 GO:0005515
Apr2g1504 702 SMART pac_2 204 245 IPR001610 -
Apr2g1504 702 SUPERFAMILY PYP-like sensor domain (PAS domain) 140 240 IPR035965 -
Apr2g1504 702 TIGRFAM sensory_box: PAS domain S-box protein 144 239 IPR000014 -
Apr2g1504 702 Pfam Kelch motif 607 654 IPR011498 GO:0005515
Apr2g1504 702 Gene3D - 360 564 IPR015915 GO:0005515
Apr2g1504 702 SUPERFAMILY Galactose oxidase, central domain 370 687 IPR011043 -
Apr2g1504 702 PANTHER ADAGIO PROTEIN 3 86 699 - -
Apr2g1504 702 Coils Coil 82 102 - -
Apr2g1504 702 Gene3D - 282 333 - -
Apr2g1504 702 CDD PAS 129 239 IPR000014 -
Apr2g1504 702 Pfam F-box domain 289 326 IPR001810 GO:0005515
Apr2g1504 702 Gene3D PAS domain 126 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1504 Apr-Chr2 21013544 21016972 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1504 132 253 AGC Kinase Gene Family AT5G58140 35.484 1.63e-14 75.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1504 2 21013544 21016972 Apr2g1504 2 21013544 21016972 ECH