Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1499 ATGTCATCGCCAAACTCCGTTCCTCAACCTCACGCGCCGCTCCTTCGCCCGCGCCGCGATGCCGCTCGCCCTCCCGTCCTCGCTCTCCTCCTCGGCCGCCGTGGCCACTCCGTTGTGGTCCGGGAGACGGCAGCGCGTGAGCTCGAGGAGCGTCGTGCCGACTGGAGTTACTCGAAGCCGGTTGTGGCGTTAGACATGACGTGGAACATCGCCTTCGTGGTGGTAGCGGCGGTGATGCTCGGTTGCACTCTAGAGGAGAAGCCAAACACGCCGATCCGGGTGTGGATCTGTGGCTACACGGTGCAGTGCCTTGTCCACGTGGCGCTGGTGTGGCTCGAGTACCGGAAGAGGAATGAGAGGCCTAGGGATGAGGAATCCGGTGGTAACGTTGAAAACGACGACGTCAACGACAGTGACGACGACGACGTTGGAGTTGGAAGCTCAGGGAATTCCTCTCGCTCTGGATTCACCAAACGATGCGCATCCTTGAATTCCATGGTTTCATTCCTTTGGTGGATGGTAGGCTTTTACTGGGTAGTATCTGGCGGTGATGTTCTTCTGCAAGATGCTCCACGTTTGTATTGGTTGGCTGTTGTCTTTCTGGCATTTGATGTCTTCTTTGCCATCTTTTGTGTTGTTTTGGCATGCTTGATTGGAATTGCTCTGTGTTGTTGTTTGCCCTGTATTATTGCTATCCTCTATGCTGTTGCAGGACAGGATGGTGCATCAGAATCAGATCTAAGTATACTTCCAAAATACAGATTTCAAATGTTAAACAACGAGAAAGCACCTAGTGACGGAGGAGGATCAATGGTTCCCGTGTGCGGTGGTGACTTGACCCAGAGAATACTTTTACCTGAGGATGCAGAATGCTGCATATGCATCTCTTCATACGAGGATGGAGCTGAACTTCATGCTCTTCCTTGCAACCATCATTTCCATTCTACATGCATAGTGAAATGGTTAAAGATGAATGCAACTTGTCCTCTTTGCAAGTACAATATTCTTAAGGGAAATGAACAGGTGTGA 1029 0.5131 MSSPNSVPQPHAPLLRPRRDAARPPVLALLLGRRGHSVVVRETAARELEERRADWSYSKPVVALDMTWNIAFVVVAAVMLGCTLEEKPNTPIRVWICGYTVQCLVHVALVWLEYRKRNERPRDEESGGNVENDDVNDSDDDDVGVGSSGNSSRSGFTKRCASLNSMVSFLWWMVGFYWVVSGGDVLLQDAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQDGASESDLSILPKYRFQMLNNEKAPSDGGGSMVPVCGGDLTQRILLPEDAECCICISSYEDGAELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGNEQV* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1499 342 MobiDBLite consensus disorder prediction 121 156 - -
Apr2g1499 342 PANTHER TARGET OF ERK KINASE MPK-1 1 342 - -
Apr2g1499 342 SMART ring_2 291 331 IPR001841 -
Apr2g1499 342 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 273 340 IPR013083 -
Apr2g1499 342 SUPERFAMILY RING/U-box 280 336 - -
Apr2g1499 342 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 1 342 - -
Apr2g1499 342 CDD RING-H2_PA-TM-RING 290 332 - -
Apr2g1499 342 ProSiteProfiles Zinc finger RING-type profile. 291 332 IPR001841 -
Apr2g1499 342 Pfam Ring finger domain 290 332 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1499 Apr-Chr2 20984691 20988049 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1499 1 341 C3H Transcription Factor Family AT1G68070 67.806 4.33e-171 478
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1499 2 20984691 20988049 Apr2g1499 2 20984691 20988049 ECH