Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1495 ATGGAGTCGAAGGGCGTGCGTTTCATAGCGTTCCAATCGATATTCTCGAGCGTTGGATCTGGAGACCTTGATGGGGTGAAAAAACTGGTGGAGCAAGTGAAGAGCGATAAAGGCTCATCGCTTTCTGATGTGATGTCCCTTCAGAACGATGCTGGAGAAACCGCGCTTTACATCGCTGCAGAGAATAATATGCACGAGATTTTCTGCTACTTGCTCAAGTTCTGTGACTTTCAAGTCGTCAAGATTCGCTCAAAGTCTGATATGAACCCATTTCACGTTGCTTCCAAACGTGGCCATCTCGATATTGTGAGGGAGCTTCTGAATACTTGGCCTGAGGTTTGCAAGTTGTGTGACTCGTCAAACACCAGTCCCTTGTATGCTGCAGCAGGTCAAGACCATTTGGATGTGGTGAATGCTATATTGGATGTTGATGTCGGTTCCATGTTTATAGTTAGGAAAAATGGCAAAACTGCACTGCACAATGCTGCTAGATATGGTGTCCTTCGCATTGTAAAAGCACTTATTGCTCGGGATTCAGGAATAGTATGCATCAAAGACAAAAAAGGTCAAACTGCACTGCATATGGCTGTCAAGGGACAGAGCACTGAAGTGGTGGAGGAGATATTGGTAGCTGATCCTTCTATAATGAATGAGCGAGATAAGAAGGGTAATACGGCTCTTCATATGGCTACGAGGAAAGGCCGTTCACAGATCGTGAGCTTTTTGCTAATCTATTCAGCCATGGATGTTAATGCTATCAATAAGCAGCAGGAAACTGCCTTGGATTTGGCAGATAAACTGCCGTATGGAGATTCAGCTTTAGAAATCAAGGGAGCCCTTGCAGAATATGGTGCCAAGCATGCCAGGAATGTTGGCAAAGTGGATGAAGCAATGGAACTCAAAAGAACTGTGAGTGATATAAAACATGAGGTGCAATCACAACTCATACAAAATGAAAAGACCCGTCGGCGAGTTTCTGGTATTGCTAAGGAATTGAAGAAACTTCACAGAGAAGCAGTTCAAAACACCATTAATTCTGTCACAGTCGTTGCTGTCCTTTTTGCCTCAATAGCATTCTTGGCCATCTTCAATTTGCCTGGTCAATATATAATGACAGGACCAGATACTGGAGAAGCTAATATAGCCCACCATGTTGGTTTCCAAGTTTTCTGCCTTCTGAATTCTACCTCCCTTTTCATTTCTCTTGCAGTTGTTGTAGTTCAAATCACTTTGGTAGCTTGGGACACAAGGGCTCAAAGGCAGATTGTGTCGGTCGTTAACAAGTTGATGTGGGCTGCATGTGCTTGCACTTGTGGTGCTTTTCTAGCAATAGCTTTTGAGGTTGTTGGAGAGAAAACATGGATGGCTATTACCATCACTGTTTTGGGAGCACCTATTCTAGTTGGGACTCTAGCAAGCATGTGCTACTTTGTTTTTCGACAACATTTTGGAACTTTCCGTAGCGATTCGCAGAGACGCATCAAGAGAGCGAGTGGAAGCAAATCATTTTCATGGTCTTATTCTGCAAATATATCAGATTTGGATGAATATAATTCTGACATTGAGAAGATATATGCCCTGTGA 1584 0.4331 MESKGVRFIAFQSIFSSVGSGDLDGVKKLVEQVKSDKGSSLSDVMSLQNDAGETALYIAAENNMHEIFCYLLKFCDFQVVKIRSKSDMNPFHVASKRGHLDIVRELLNTWPEVCKLCDSSNTSPLYAAAGQDHLDVVNAILDVDVGSMFIVRKNGKTALHNAARYGVLRIVKALIARDSGIVCIKDKKGQTALHMAVKGQSTEVVEEILVADPSIMNERDKKGNTALHMATRKGRSQIVSFLLIYSAMDVNAINKQQETALDLADKLPYGDSALEIKGALAEYGAKHARNVGKVDEAMELKRTVSDIKHEVQSQLIQNEKTRRRVSGIAKELKKLHREAVQNTINSVTVVAVLFASIAFLAIFNLPGQYIMTGPDTGEANIAHHVGFQVFCLLNSTSLFISLAVVVVQITLVAWDTRAQRQIVSVVNKLMWAACACTCGAFLAIAFEVVGEKTWMAITITVLGAPILVGTLASMCYFVFRQHFGTFRSDSQRRIKRASGSKSFSWSYSANISDLDEYNSDIEKIYAL* 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1495 527 Pfam Domain of unknown function 338 445 IPR026961 -
Apr2g1495 527 Gene3D - 13 145 IPR036770 -
Apr2g1495 527 ProSiteProfiles Ankyrin repeat profile. 154 181 IPR002110 GO:0005515
Apr2g1495 527 SUPERFAMILY Ankyrin repeat 14 268 IPR036770 -
Apr2g1495 527 PANTHER ANKYRIN REPEAT PLANT-LIKE PROTEIN 2 527 - -
Apr2g1495 527 Gene3D - 146 307 IPR036770 -
Apr2g1495 527 Coils Coil 318 338 - -
Apr2g1495 527 ProSiteProfiles Ankyrin repeat region circular profile. 222 247 - -
Apr2g1495 527 PANTHER PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 2 527 - -
Apr2g1495 527 ProSiteProfiles Ankyrin repeat region circular profile. 154 181 - -
Apr2g1495 527 SMART ANK_2a 51 79 IPR002110 GO:0005515
Apr2g1495 527 SMART ANK_2a 154 183 IPR002110 GO:0005515
Apr2g1495 527 SMART ANK_2a 120 150 IPR002110 GO:0005515
Apr2g1495 527 SMART ANK_2a 188 217 IPR002110 GO:0005515
Apr2g1495 527 SMART ANK_2a 86 115 IPR002110 GO:0005515
Apr2g1495 527 SMART ANK_2a 222 252 IPR002110 GO:0005515
Apr2g1495 527 ProSiteProfiles Ankyrin repeat profile. 222 255 IPR002110 GO:0005515
Apr2g1495 527 Pfam Ankyrin repeats (3 copies) 186 252 IPR002110 GO:0005515
Apr2g1495 527 Pfam Ankyrin repeats (3 copies) 118 177 IPR002110 GO:0005515
Apr2g1495 527 Pfam Ankyrin repeats (3 copies) 20 108 IPR002110 GO:0005515
Apr2g1495 527 ProSiteProfiles Ankyrin repeat profile. 188 221 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1495 Apr-Chr2 20948406 20951718 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1495 1 527 Miscellaneous Gene Families AT2G01680 68.972 0.0 735
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1495 2 20948406 20951718 Apr2g1495 2 20948406 20951718 ECH