Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1485 ATGTCAAACACAAACATGTTTCTCTTTCTTCTCTTTTTTCTCACACTCCTTTCGGCCATGATAACGCCATCAACCTCCGCCGTCGACTCCTTCATCTTCGGCGGTTGCTCACAACCCAAGTACACGCCGGGTTCCGCCTACGAGACCAGCGTCAACTCGCTCCTCACCTCGCTAGTCAACTCCGCCGGGTTCACCAACTACAACAACTTCACCATCCAGGCCACCGCCGCCTCCGACACCCTCTACGGCCTATTCCAGTGCCGGGGTGACCTCGACAACGACCAGTGCTCGCGCTGCGTGGCGCGTGCGGTCAGTCAACTCGGCACCCTCTGCTCCGTTTCCTGCGGTGGCGCGTTGCAGCTGGACGGCTGTTTCGTCAAGTACGATAATGCCACGTTCATAGGGGTGGAGGACAAGACGGAGGTGATCAAGAAATGTGGACCGTCGATTGGCTTGACTTCGGATTCGTTGACTCGAAGGGATGCTGTGCTGGCGTATTTGCAGACGCTTGATGGGACTTACAAGACGTTCAGGAGGAGTGGGTCTGGGGACTTTCAGGGTGTGGCGCAGTGCACTGGAGATTTGAGTCCCAGCGAGTGTCAGGATTGCCTTTCTGATGCCATCCAACGGTTGAGGACTGAGTGTGGACCCACCACTTGGGGGGAGATCTATTTGGCCAAGTGCTACGCGCGGTACTCCGAAGGTGGTACTCACTCGCGTGGCAGTTACGATGATAGCAATCACAATGATGATGAGATTGAGAAAACACTCGCCATACTAATTGGACTCATTGCCGGGGTTGCTCTAATCATAGTTTTCCTTTCCTTCTTGTCCAAGGTGTGCGAAAAGCACAAAGGTGGTAAATAA 867 0.5421 MSNTNMFLFLLFFLTLLSAMITPSTSAVDSFIFGGCSQPKYTPGSAYETSVNSLLTSLVNSAGFTNYNNFTIQATAASDTLYGLFQCRGDLDNDQCSRCVARAVSQLGTLCSVSCGGALQLDGCFVKYDNATFIGVEDKTEVIKKCGPSIGLTSDSLTRRDAVLAYLQTLDGTYKTFRRSGSGDFQGVAQCTGDLSPSECQDCLSDAIQRLRTECGPTTWGEIYLAKCYARYSEGGTHSRGSYDDSNHNDDEIEKTLAILIGLIAGVALIIVFLSFLSKVCEKHKGGK* 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1485 288 Pfam Salt stress response/antifungal 36 130 IPR002902 -
Apr2g1485 288 Pfam Salt stress response/antifungal 174 233 IPR002902 -
Apr2g1485 288 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 3 285 - -
Apr2g1485 288 Gene3D - 156 235 IPR038408 -
Apr2g1485 288 Gene3D - 28 133 IPR038408 -
Apr2g1485 288 ProSiteProfiles Gnk2-homologous domain profile. 29 133 IPR002902 -
Apr2g1485 288 PANTHER PLASMODESMATA-LOCATED PROTEIN 6 3 285 - -
Apr2g1485 288 ProSiteProfiles Gnk2-homologous domain profile. 138 237 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1485 Apr-Chr2 20879137 20882172 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1485 6 232 Pollen Coat Proteome AT4G20670 23.967 1.67e-14 70.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1485 2 20879137 20882172 Apr2g1485 2 20879137 20882172 ECH