Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1483 ATGGGTGACATGAAAGATAAGGTGAAGGGGTTCATGAAGAAAGTCAACAACCCTTTCTCTTCTTCATCATCTGGTAAATTCAAGGGCCAAGGTAGAGTCTTGGGATCTGCTTCTTCTTCTCAACCCGCTAATTCCACTCCTACCGTTCGCCCCACTCCTACGCAGAACCCTAATTCGAAACCCACTTCATCTGCAACCAATCCCAGACCCATGCCACAGAAAACGGAGCATGACAGAACTACCGAGAAGCCTCGCAAAGATGATGGGTTTGACCCTTTTGATTCTTTGGTCACTTCATCAAAGAGATCTCAAAATGGGTATTCACTGAATGTGTATGAATGCCCGATTTGTAAACAGCCCTTTGGATCTGAAGATGAGGTGTCTGTACACGTGGATAGTTGTTTGAGTGAGCGTGGAAGTGATGATCAAAACGGGGTCTTAGAGAGTGAAGCTGGATCTAATAGTGAAATTGAATTAGATGTTTGTGTTGGTTCTTACATTTCAGGGAAGCCATCTGAAGGATCAGTTGATGTTGTTCTTAAATTGTTGAGGAACATTGGTAGGGAACCCGAGAATGTCAAGTTTAGGAAGATTAGGATGAATAATCCTAAGATAAAAGAGACTGTTGGTGAGGTTACCGGTGGAGTTGAGTTGCTGAGCTTCATTGGATTTGAACTTCGGGAGGAAAATGGAGAGACGTGGGCGGTGATGGAGGTTCCGACTGAGGAGCAAATAAAATTGATTAAGAAAGCAATAGTGTTACTAGAATCACAACTGGTACAAGGACCTACAAAGAGTGGGAATTCGGTGTCTGCAACGAATGCTGAGATAGATGCAAAGGTTGAACCCAAGCCGGTTGACAGACAGGTGAAGGTCTTCTTTGCCGTCCCTGAAAGTATCGCAGCTAAAATTGAGCTACCAGATTCCTTCTATAACCTTTCAGTCGAAGAGGTGAGGAGAGAAGCTGAATTGAGGAGAAAAAAAATTGCACACTCTCAGCTATTAATCCCTAAATCATTTAAAGAAAAGCAAGCAAAAGCTGCCAGGAAGAGATACACAAAAGCAATTATCAGGATTCAGTTTCCAGATGGAGTTGTACTTCAAGGTGTATTTGCTCCATGGGAACCAACTACTGCTCTCTATGAGTTTGTCAGCTCTGCATTAAAAGAACCAGGTTTGGAATTTGAGCTAATGCATCCTGTACTCGTCCAACGGCGCGTGATCCCTCATTTTCCAAAAGCAGGGGAAAATGCTAGAACAATAGAGGAAGAAGACCTGGTACCTTCTGCTTTAATCAAGTTCAAGCCCATGGAAACAGATTCTGTTGTTTTCTCTGGTCTCAAAAATGAATTGCTTGAAATCAGTGAACCCCTCGTAAATGGTTAG 1386 0.43 MGDMKDKVKGFMKKVNNPFSSSSSGKFKGQGRVLGSASSSQPANSTPTVRPTPTQNPNSKPTSSATNPRPMPQKTEHDRTTEKPRKDDGFDPFDSLVTSSKRSQNGYSLNVYECPICKQPFGSEDEVSVHVDSCLSERGSDDQNGVLESEAGSNSEIELDVCVGSYISGKPSEGSVDVVLKLLRNIGREPENVKFRKIRMNNPKIKETVGEVTGGVELLSFIGFELREENGETWAVMEVPTEEQIKLIKKAIVLLESQLVQGPTKSGNSVSATNAEIDAKVEPKPVDRQVKVFFAVPESIAAKIELPDSFYNLSVEEVRREAELRRKKIAHSQLLIPKSFKEKQAKAARKRYTKAIIRIQFPDGVVLQGVFAPWEPTTALYEFVSSALKEPGLEFELMHPVLVQRRVIPHFPKAGENARTIEEEDLVPSALIKFKPMETDSVVFSGLKNELLEISEPLVNG* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1483 461 SUPERFAMILY Ubiquitin-like 322 434 IPR029071 -
Apr2g1483 461 MobiDBLite consensus disorder prediction 1 99 - -
Apr2g1483 461 ProSiteProfiles UBX domain profile. 350 434 IPR001012 GO:0005515
Apr2g1483 461 Gene3D - 168 256 - -
Apr2g1483 461 CDD UBX_UBXN6 355 435 - -
Apr2g1483 461 CDD PUB 167 257 - -
Apr2g1483 461 SUPERFAMILY PUG domain-like 170 257 IPR036339 -
Apr2g1483 461 Pfam PUB domain 173 248 IPR018997 -
Apr2g1483 461 Gene3D - 344 437 - -
Apr2g1483 461 SMART PGNneu 174 241 - -
Apr2g1483 461 MobiDBLite consensus disorder prediction 15 71 - -
Apr2g1483 461 Pfam UBX domain 351 400 IPR001012 GO:0005515
Apr2g1483 461 MobiDBLite consensus disorder prediction 72 92 - -
Apr2g1483 461 PANTHER PLANT UBX DOMAIN-CONTAINING PROTEIN 2 1 460 - -
Apr2g1483 461 Gene3D Classic Zinc Finger 108 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1483 Apr-Chr2 20864092 20869729 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1483 1 382 C2H2 Transcription Factor Family AT2G01650 56.203 1.35e-146 422
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1483 2 20864092 20869729 Apr2g1483 2 20864092 20869729 ECH