Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1482 ATGGAGAGAGATTTCATGGGTCTCAGCTCGAAAGAACCACTCGCTGTAGTCAAGGACGAGACGAACGATGATGGCTGCAAAGACTCAGGCTTCACGAAGGGTTCGGTTGCACAATGGCCTTTTTCGAACAAAGTCTCTGCCCTTCCACATTTGATGTCTTTCAAAGTTTCACAAGATGATAATACTAAGAAAATGGTGTCTGATCCCATATCTTCTGCTGGGTTTATGAGTATCTTAAGTCAAGATGCATTAGACTATAGTCAAAAGCGATCTGCTGGTGAACCACAGAAATCTTTCAATCACGATGGGCAAGGTGGCCTTCATTTTTCGCTGACTCCATATCCTGTACAATATGATGTGAATTCTATGAATCGTCCTCATGATGCGAAGATATTTTCAGTTTCCAATCAAGCAATTTCAGTTTCCTTGGGGAATCCATTCCTGAAGAATCATTTTGCAACTGCTGGTCAGAATTTGAATGGGACTAATATGAAGCTGCCGTTACTTGGGGGAATACCTGTTACAGCACCTCATTCAGTTCTTCCCACCATTGGTGCTGTTGCTGGAACAACAGAATCATGTGTGAAACCATCTGCGCCTTCTGCTCAACTTACCATCTTCTATGCGGGAACCGTCAATGTCTTTGATGATATCTCTGCTGAAAAGGCACAAGCTATCATGTTGTTGGCTGGTAATAGCTTATCTGCAGCTTCTAACATGGCACAGCCAAAAGTTCAGGTGCCCGTCTCAAAGTTGGCTGCCGGTGACGGTGTGCCTGTGAGTCAACCTGCAAATACACCGCGTGGCTCTGGTCTTTCAAGTCCTTTATCAGGGAGTGGCTCAACTAGCACCGATGAATTTCTGGCAGCTAAAACAACTGGAGTTCCCACCACTCCTGTTAGCAATGTTGAGCCTCCTAAGGTAGTCAATGCAACCACTATGTTGACATCAGCTGTGCCTCAGGCTCGGAAAGCATCCTTGGCTCGGTTTTTAGAAAAACGCAAGGAAAGGGTGATGAGTGCTGCACCATATAACCTCAACAAGAAGTCTGAAGAGTGTGCCAATGAAGAATACAATGGTGCTAACTAA 1089 0.449 MERDFMGLSSKEPLAVVKDETNDDGCKDSGFTKGSVAQWPFSNKVSALPHLMSFKVSQDDNTKKMVSDPISSAGFMSILSQDALDYSQKRSAGEPQKSFNHDGQGGLHFSLTPYPVQYDVNSMNRPHDAKIFSVSNQAISVSLGNPFLKNHFATAGQNLNGTNMKLPLLGGIPVTAPHSVLPTIGAVAGTTESCVKPSAPSAQLTIFYAGTVNVFDDISAEKAQAIMLLAGNSLSAASNMAQPKVQVPVSKLAAGDGVPVSQPANTPRGSGLSSPLSGSGSTSTDEFLAAKTTGVPTTPVSNVEPPKVVNATTMLTSAVPQARKASLARFLEKRKERVMSAAPYNLNKKSEECANEEYNGAN* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1482 362 Pfam tify domain 199 231 IPR010399 -
Apr2g1482 362 MobiDBLite consensus disorder prediction 256 286 - -
Apr2g1482 362 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 14 356 IPR040390 -
Apr2g1482 362 PANTHER PROTEIN TIFY 7 14 356 - -
Apr2g1482 362 ProSiteProfiles Tify domain profile. 197 232 IPR010399 -
Apr2g1482 362 MobiDBLite consensus disorder prediction 263 286 - -
Apr2g1482 362 Pfam Jas motif 320 344 IPR018467 -
Apr2g1482 362 SMART tify_2 197 232 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1482 Apr-Chr2 20844088 20847903 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g1482 39 350 Tify Gene Family AT3G17860 38.323 5.93e-38 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Apr2g1482 tify 5.5e-18 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1482 2 20844088 20847903 Apr2g1482 2 20844088 20847903 ECH