Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0459 ATGTCAAGCAAGGGAAAAGACATAGTAGAAGGATCATCAAGATCCTCTCCAAGTGGTGCTGATCAGCAGCAACAGCAGTTACCACTGAGTCGCTATGAGTCTCAGAAGAGAAGGGATTGGAACACTTTTGGACAGTACTTGAGGAATCAAAGGCCTCCTGTCCCACTTTCTCAATGCAATTCCAACCATGTTCTTGAATTCCTTAGGTATTTGGATCAGTTTGGGAAAACCAAAGTGCACTCACAAGGGTGTTTGTTCTTTGGGCAAAGTGAACCACCTGGACCCTGCACTTGCCCTCTTAGACAAGCTTGGGGTAGCCTTGATGCACTCATTGGAAGGTTGAGAGCTGCATATGAAGAAAATGGAGGCCTTCCTGAAACTAATCCTTTTGCAAGTGGTGCCATAAGAGTCTATCTACGTGAGGTGAGGGACTCTCAAGCCAAGGCTAGAGGAATCCCTTATAAGAAGAAAAAGAAGAAGAGGAATATAATCAAGCCCAACGGGGAAGCCACCTCAAACTTGCCTCTGCAGTAA 534 0.4569 MSSKGKDIVEGSSRSSPSGADQQQQQLPLSRYESQKRRDWNTFGQYLRNQRPPVPLSQCNSNHVLEFLRYLDQFGKTKVHSQGCLFFGQSEPPGPCTCPLRQAWGSLDALIGRLRAAYEENGGLPETNPFASGAIRVYLREVRDSQAKARGIPYKKKKKKRNIIKPNGEATSNLPLQ* 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0459 177 PANTHER PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 6 2 175 - -
Apr2g0459 177 MobiDBLite consensus disorder prediction 1 31 - -
Apr2g0459 177 Pfam ALOG domain 23 144 IPR006936 -
Apr2g0459 177 ProSiteProfiles ALOG domain profile. 31 158 IPR006936 -
Apr2g0459 177 MobiDBLite consensus disorder prediction 155 177 - -
Apr2g0459 177 MobiDBLite consensus disorder prediction 1 34 - -
Apr2g0459 177 PANTHER PROTEIN G1-LIKE2 2 175 IPR040222 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0459 Apr-Chr2 5303065 5304955 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g0459 2 5303065 5304955 Apr5g0162 5 1429603 1430166 ECH
Apr2g1856 2 24145293 24145826 Apr2g0459 2 5303065 5304955 ECH
Apr3g0977 3 24654586 24655125 Apr2g0459 2 5303065 5304955 ECH
Apr2g0459 2 5303065 5304955 Apr1g1524 1 24730139 24737957 ECH
Apr2g0459 2 5303065 5304955 Apr3g0977 3 24654586 24655125 ECH
Apr2g0459 2 5303065 5304955 Apr2g0459 2 5303065 5304955 ECH