Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g1631 ATGGCTGCAAGAGAAATCCTCCATAAGATGAAGGAAAAAGTTGGGCTGCGTTCATCGGAACCTGACTCAGGGAAAGGAAAGAGCAAGATTTCAAGGCGTGTAACTCATGGATTTCACTTAGTAAAGGGAAGATCATACCATGCCATGGAGGATTTTGTTGTTGCTGAATTTAAGCAAGTTGATAGCAATGAACTAGGCTTGTTTGCGATATTCGATGGCCATGCCGGTCACAATGTGCCTAATTACTTGCGGTCTCACTTGTTTGAAAACATCTTAAAAGAGCCTGACTTCTGGAAAGATCCTGAAAATGCTGTCAGGAGAGCCTATAGTATAACCGATTCTAGCATTTTGGAGAAATCAGGRGAACTGGGTAGAGGGGGTTCAACTGCTGTTACTGCAATATTGATGAATTGTCAGAAGTTAGTCATAGCTAATATTGGTGATTCTCGGGCCGTCTTATGCAAGAAAGGCCTTGCCAAACAACTATCGGAGGATCATGAGCCACACARAGAAAGTGAAGATATAAAAAATAGAGGTGGTTTTGTGTCAAAATTTCCAGGCGACGTTCCAAGGGTTGATGGCCGGTTGGCAGTATCAAGGGCATTTGGTGACAAAAGTCTGAAGAAACACTTGAGTTCAGAACCACATGTGACAGTGGAGCTTGTACAAGATGATGTAGAATTCCTCATATTAGCAAGTGATGGATTATGGAAGGTAATGACAAATCAAGAAGCAGTTAATACCATCAAAGACATAAAGGATGCTCGGTCTTCGGCGAAACGCCTTACTGAAGAAGCACTTAACAGGAAAAGCACAGATGATATATCCTGCATTGTTGTGAAATTTCAGTGA 852 0.4178 MAAREILHKMKEKVGLRSSEPDSGKGKSKISRRVTHGFHLVKGRSYHAMEDFVVAEFKQVDSNELGLFAIFDGHAGHNVPNYLRSHLFENILKEPDFWKDPENAVRRAYSITDSSILEKSGELGRGGSTAVTAILMNCQKLVIANIGDSRAVLCKKGLAKQLSEDHEPHXESEDIKNRGGFVSKFPGDVPRVDGRLAVSRAFGDKSLKKHLSSEPHVTVELVQDDVEFLILASDGLWKVMTNQEAVNTIKDIKDARSSAKRLTEEALNRKSTDDISCIVVKFQ* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g1631 283 ProSitePatterns PPM-type phosphatase domain signature. 67 75 IPR000222 GO:0043169
Amo18g1631 283 Pfam Protein phosphatase 2C 47 275 IPR001932 -
Amo18g1631 283 CDD PP2Cc 42 282 IPR001932 -
Amo18g1631 283 SMART PP2C_4 25 280 IPR001932 -
Amo18g1631 283 PANTHER PROTEIN PHOSPHATASE 2C 1 283 IPR015655 GO:0004722|GO:0006470
Amo18g1631 283 SUPERFAMILY PP2C-like 32 282 IPR036457 -
Amo18g1631 283 ProSiteProfiles PPM-type phosphatase domain profile. 35 282 IPR001932 -
Amo18g1631 283 PANTHER PROTEIN PHOSPHATASE 2C 39-RELATED 1 283 - -
Amo18g1631 283 Gene3D - 30 283 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g1631 Amo-Chr18 32443099 32445606 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g1631 1 283 PP2C-type Phosphatase Gene Family AT3G15260 70.242 8.94e-158 439
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g1631 18 32443099 32445606 Amo18g1631 18 32443099 32445606 ECH
Amo18g1631 18 32443099 32445606 Amo08g1630 08 26836978 26839144 hybridization
Amo18g1631 18 32443099 32445606 Amo13g2392 13 41719216 41724885 PCT
Amo13g2392 13 41719216 41724885 Amo18g1631 18 32443099 32445606 PCT