Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g4979 ATGTCTCTGCCACCCATAGAGTGTATTTACGTAACGGAGGACTGTGTTCGCGAATGGAAGAGTGGCAATCCTGCCCTCAGGGTTTCCGAACCAGTTCCATCGCTACGCTTCCTCTACGAGCTTTGCTGGACTATGGTTCGGGGTGAATTGCCGTTTCAGAAGTGTAAAGTAGCGTTAGATTCTGTCATATTCTCCGACAGACCGCCGACTGAGAAATTAGCTTCAAATTTTGCAGATATAGTGACCCAAATGGCCCAAGATCATACAATGTCGGGAGAGTTTCGATCTCGTCTCATTAAACTGGCAAGATGGCTTGTGGAATCTGAATTGGTTCCAGTTAGGCTACTTCAAGAACGTTGTGAGGAAGAGTTTTTGGGGGAGGCTGAAATGATCAAAATAAAGGCTCAGGATTTGAAGGGAAAAGAGGTCAGAGTTAATACACGGCTTCTTTATCAACAAACCAAATTTAACCTTCTTAGAGAAGAGAGTGAGGGCTATGCAAAGCTGGTCACTCTTCTTTGCCGAGATTCCGAAGCTCCAACTCAAAAGGCATCTGCCGCAACAATTGGCATTATTAAGTCGTTAATTGGCCATTTTGATTTGGATCCAAATCGTGTTTTTGATATTGTTCTTGAGTGTTTTGAACTTCAACCTGATAACAGTGTGTTTCTAGAGCTGATTCCTATTTTCCCCAAGTCTCATGCTTCACAGATTCTTGGATTTAAGTTTCAATATTATCAGCGCATGGATGTCAGCTGCCCTGTTCCCTTTGGGCTCTATAAGCTCACAGCGTTGCTGGTGAAACAAGATTTTATTGATATTGATAGCATATATGCACATCTACTTCCGAAGGATGAAGAAGCATTTGAGCATTATAACACTTTCTCTTCCAAGCGGCTTGATGAGGCTAACAAAATTGGAAGAATAAACCTTGCTGCTACTGGAAAAGATCTAATGGATGATGAAAAACAGGGTGACGTCGCAATAGATCTTTTTGCTGCTATAGACATGGAAACTGATGCAATTGAAGAGCGAAAGTCTGAGCTTCAAAACAGTCAAACTTTGGGCTTGCTTACCGGCTTTCTTTCGGTGGATGACTGGTATCATGCACATATGCTGTTTGGTCGTCTGTCACCACTCAATGCAGTGGAACATATCCAAATATGTGAGAGTTTGTTTAGGCTCATTGAGAGGACAATTTCTTCAGCATATGATGTTATTCGGCACGCACATCATCAAAACTCTGGATCATCCACAGGAGTTAGTACTGATCCTATGGATGTAGATAACTCCTCAAGACGAAGTTCTTTCATAGATCTTCCGAAGGAGCTTTTTCAGATGCTTGCTTGTACTGGACCCTACCTTTACCGTGACCCTATATTGTTGCAGAAGGTTTGTAGGGTGCTGAGAGGTTATTACTTTTCTGCCCTTGAGCTTGTTAGTCATGGCGACAGTGCCTTGAATTCTCAATTTCCTGGAATTGGAAATCCTCATCTACACCTGAAAGATGCAAGGCTAAGGGTGGAGGATGCTTTAGGAGCTTGCCTACTACCTTCTTTGCAACTGATTCCTGCCAATCCAGCTGTTGGCCAGGAAATTTGGGAACTAATGAGTCTCCTTCCTTATGAGGTGCGATATCGTTTATACGGTGAATGGGAGAAAGATGATGAGCGCATACCTATGCTCCTAGCAGCAAGACAAACAGCCAAGTTGGACACTAGACGCATTTTAAAAAGGTTGGCAAAGGAGAATTTGAAGCAGCTAGGTCGAATGGTCGCAAAATTAGCTCATGCTAACCCTATGACTGTCCTACGAACAATTGTTCATCAGATTGAGGCATACAGAGACATGATTACTCCTGTAGTGGATGCATTTAAGTATTTGACTCAGCTAGAGTATGACATTTTGGAATATGTTGTGATTGAGCGCTTGGCACTTGGTGGACGTGATAAGCTAAAAGACGATGGTCTAAATTTGTCAGATTGGCTTCAATCACTAGCTTCATTTTGGGGTCACCTGTGTAAGAAGTACCCTTCAATGGAATTGCGAGGCCTTTTCCAGTATCTAGTGAACCAGTTAAAAAAGGGGCAAGGAATTGAGCTTGTTCTATTGCAGGAACTTATTCAACAAATGGCAAACGTCCAGTACACAGAGAACTTGACTGAGGAGCAGCTGGATGCCATGGCAGGGAGTGACACTCTTCGATATCAAGCAACTTCTTTTGGAGTAACTCGAAATAATAAGGCATTGTTAAAGTCTACTAGCAGACTTAGAGATGCATTACTTCCCAAAGATGAACCGAAGTTGGCGATCCCCCTCCTATTGCTTATTGCTCAACATCGTTCTCTGATTGTCATCAATGCAGATGCACCATACATTAAGATGGTTTGTGAGCAATTTGATAGATCCCATGGAACTCTTCTTCAATATGTGGAATTTCTTTGCAGTGCAGTTACTCCAGCATCAAATTATGCTGCACTCATTCCATCGCTTAATGACCTGGTCCACCTTTACCACCTGGACCCTGAGGTTGCTTTCTTGATATATCGCCCTGTGATGAGACTTTTCAAGTCTCAGAGGAGTCCTGATGTTTGCTGGCCGTTGGATGATAATAATGCTGCAAATGATGCATCTACAGAATCTGATCTTGTAGATCATTCTGGCAGTATGGTTCTAGATCTTGGCTCTGCTCGAAATCCTATAAGCTGGCAATATCTACTTGATACTGTTAAAACCATGCTGCCTTCAAAAGCGTGGAATAGCCTTTCTCCTGATCTTTATGCAACATTTTGGGGCCTCACACTATATGATTTGTACGTTCCAAAAAGTCGCTACGAGTCTGAAATAGCCAAGCTGCATGCTAATCTTAAGTCTTTGGAGGAGCTGTCTGACAATTCAAGCTCAGCAATCACCAAGAGGAAGAAGGAAAAGGAAAGAATTCAAGAATCACTTGACCGTCTGATTAGTGAACTTCATAAACATGAAGAGAATGTTGCATCAGTTCATAGGCGGCTTTCTCACGAAAAGGACAAATGGTTAAGTTCCTGTCCTGACACTTTGAAGATCAATATGGAGTTTCTTCAGCGTTGTATATTTCCACGCTGCACATTCAGTATGCCAGATGCTGTTTATTGTGCTATGTTTGTGCACACACTTCATTCGCTCGGAACCCCCTTTTTCAATACCGTCAACCATATAGATGTCCTGATTTGTAAGACTCTACAACCTATGATATGTTGCTGCACAGAATATGAGGCAGGCAGGCTTGGTAGGTTTCTGTATGAGACTTTGAAGATTGCTTACTATTGGAAGAGTGATGAATCTATTTATGAACGTGAGTGTGGAAACATGCCTGGCTTTGCTGTTTATTATAGATATCCAAACAGCCAGCGAGTTACATATGGCCAGTTTATCAAGGTACACTGGAAGTGGAGTCAGAGAATAACCAGACTATTAATTCAGTGTTTGGAATCTAGTGAGTACATGGAAATTAGAAATTCTCTCATTATGTTGACAAAGATTTCTGGAGTTTTCCCTGTTACTCGGAAGAGTGGGATAAACCTTGAAAAACGGGTGGCTAAGATTAAAAGTGATGAAAGAGAGGATCTTAAGGTGCTGGCAACTGGTGTTGCTGCTGCATTAGCTGCTAGGAAGCCTTCATGGGTTACTGATGAAGAATTCGGTATGGGATATCTTGAGTTGAAGCCTGCGCCATCTATTAGTAAATCTTCTGCTGGAAATTCAGCATCTGTACAAAGTGGGATAAGTCTTGGTGTTTCTCAAACTGAATCTGGCAGTGGAAAACATCTGGACTCAGTAAACACAGTCAAAGACCAGACAAAAATAAAAACTGCAGACAGCAAGGTAGAAAGAACTGACAGCACAATAGCTGGAAAATCTGATTCTGGCCAAGCAAAACTCAAGGGTAATTCATCATTAAATGGATTGGATGCTCCATCAACCTTACCCTCACCTGCTGTACAATCTGGAGCAACAAAATCCATGGAAAACCAAAAGCAAGCAGAAGAATCTGTAAGTAGAGCATCGGAAGAACATGTTCCGAGAGCTGCAGAGTCAAGAGCTTCCGGGAAACGTTCGGCACCTGCTAGCTCACACTCAAAGCCCTCGAAACAAGATCCTGCAAAAGAGGATACTAGATCTGGTAAAGCTGTTGCCAGAGCGTCTGGTTCTTTGAGCAGTGACAAGGATATACAAAACCATGCATCAGAGGGAAGACACACTGGAAGTACTAATTTATCTTCTTCAGTCAATGCTAATGGTAACAGTATTTCAGCTTCTGCAAAAATCTCAGCTCCATCTACTAAGGGTGAGACCGGTAGTGAGCTCAAGGCTGAGATGGGTGGCGTAAAGTCTTCTGATATTAGGGCTTCTGTGGTGAAGGATGATGGAAATGATGTTATTGACTCGGTAAGAGGTTCCTCTTCACGTGTAGTTCATTCTCCTAGGCATGACAATACAATTGTTACTTCAAAGTCTACTGATAAAGCCCAGAAGAGAGCTAGTTCTGCTGAAGAACCTGATAGACTTGGTAAACGGCGTAAAGCGGAGGCGGAGCAAAGAGATGTCGAGAATGAAATCAGATTATCTGAAAGAGAGAAGCTTGTAGATCCTCGATTATCTGATGAGAAATTGGGGCCGGAAGAACTTGGTTTGTACAGGGCAGGGGATAAGCCATTGGAAAGGGCAAAAGACAAAGGAAATGAAAGGTATGAAAGAGAGCACAGGGAGAGATTGGACCGTGTGGATAAGTCTCGTGGAGATGACTTCATTGTGGAGAAACCTAGGGATAGGTCAATCGAAAGATATGGAAGAGAACGATCTGTTGAGAGAATGCAAGAAAGGGGTAGTGAAAGGGGTTTCAATAGACTCCCTGAGAAGGCTAAGGATGATAGAAGCAAGGATGATAGAAGTAAATTACGATACAATGATGTATCTATAGAAAAATCTCATGCAGATGATCGCTTCCATGGGCAAAGCCTGCCTCCACCACCCCCATTACCTCCAAATATGGTTCCTCAATCTGTTGGTGGTGGTAGGCGTGATGAAGATGCTGATAGGAGGTACGGAGCCACTAGACATTCTCAAAGGCTTTCTCCAAGGCATGAAGAAAAAGAACGGAGACGGTCTGAAGAGGCTGTGGTTTCCCAGGATGATGCAAAACGCAGAAAAGAAGATGATTTTCGAGATAGGAAACGCGAGGAACGAGAAGCATTATCATTGAAGGTTGAAGAGAGGGATAGAGAGAGAGAGCGGGATAGAGAAAAAACAAATCTTCTAAAGGAAGAGTTGGATTTAAATGCTGCATCCAAGAGACGTAAGCTCAAGAGGGAGCATCTGCCAGCTGGTGAACCTGGGGAGTACTCACCAGTGGCTCCTCCACCTCCACCCCTAGGAATTGGTGTTTCACAAGCTTATGATGGAAGAGACAGGGTAGACAGGAAGGGACCCATGATCCAACATGCAAATTACATAGATGAACCAGGTCTCAGAATTCATGGTAAAGAGGTAGCCAGCAAGCTGAATCGTCGTGATTCTGATCCAATGTATGATCGAGAATGGGATGATGAGAAGAGGCAAAGAGCTGATCAGAAACGGCGGCACCGAAAATAA 5631 0.4301 MSLPPIECIYVTEDCVREWKSGNPALRVSEPVPSLRFLYELCWTMVRGELPFQKCKVALDSVIFSDRPPTEKLASNFADIVTQMAQDHTMSGEFRSRLIKLARWLVESELVPVRLLQERCEEEFLGEAEMIKIKAQDLKGKEVRVNTRLLYQQTKFNLLREESEGYAKLVTLLCRDSEAPTQKASAATIGIIKSLIGHFDLDPNRVFDIVLECFELQPDNSVFLELIPIFPKSHASQILGFKFQYYQRMDVSCPVPFGLYKLTALLVKQDFIDIDSIYAHLLPKDEEAFEHYNTFSSKRLDEANKIGRINLAATGKDLMDDEKQGDVAIDLFAAIDMETDAIEERKSELQNSQTLGLLTGFLSVDDWYHAHMLFGRLSPLNAVEHIQICESLFRLIERTISSAYDVIRHAHHQNSGSSTGVSTDPMDVDNSSRRSSFIDLPKELFQMLACTGPYLYRDPILLQKVCRVLRGYYFSALELVSHGDSALNSQFPGIGNPHLHLKDARLRVEDALGACLLPSLQLIPANPAVGQEIWELMSLLPYEVRYRLYGEWEKDDERIPMLLAARQTAKLDTRRILKRLAKENLKQLGRMVAKLAHANPMTVLRTIVHQIEAYRDMITPVVDAFKYLTQLEYDILEYVVIERLALGGRDKLKDDGLNLSDWLQSLASFWGHLCKKYPSMELRGLFQYLVNQLKKGQGIELVLLQELIQQMANVQYTENLTEEQLDAMAGSDTLRYQATSFGVTRNNKALLKSTSRLRDALLPKDEPKLAIPLLLLIAQHRSLIVINADAPYIKMVCEQFDRSHGTLLQYVEFLCSAVTPASNYAALIPSLNDLVHLYHLDPEVAFLIYRPVMRLFKSQRSPDVCWPLDDNNAANDASTESDLVDHSGSMVLDLGSARNPISWQYLLDTVKTMLPSKAWNSLSPDLYATFWGLTLYDLYVPKSRYESEIAKLHANLKSLEELSDNSSSAITKRKKEKERIQESLDRLISELHKHEENVASVHRRLSHEKDKWLSSCPDTLKINMEFLQRCIFPRCTFSMPDAVYCAMFVHTLHSLGTPFFNTVNHIDVLICKTLQPMICCCTEYEAGRLGRFLYETLKIAYYWKSDESIYERECGNMPGFAVYYRYPNSQRVTYGQFIKVHWKWSQRITRLLIQCLESSEYMEIRNSLIMLTKISGVFPVTRKSGINLEKRVAKIKSDEREDLKVLATGVAAALAARKPSWVTDEEFGMGYLELKPAPSISKSSAGNSASVQSGISLGVSQTESGSGKHLDSVNTVKDQTKIKTADSKVERTDSTIAGKSDSGQAKLKGNSSLNGLDAPSTLPSPAVQSGATKSMENQKQAEESVSRASEEHVPRAAESRASGKRSAPASSHSKPSKQDPAKEDTRSGKAVARASGSLSSDKDIQNHASEGRHTGSTNLSSSVNANGNSISASAKISAPSTKGETGSELKAEMGGVKSSDIRASVVKDDGNDVIDSVRGSSSRVVHSPRHDNTIVTSKSTDKAQKRASSAEEPDRLGKRRKAEAEQRDVENEIRLSEREKLVDPRLSDEKLGPEELGLYRAGDKPLERAKDKGNERYEREHRERLDRVDKSRGDDFIVEKPRDRSIERYGRERSVERMQERGSERGFNRLPEKAKDDRSKDDRSKLRYNDVSIEKSHADDRFHGQSLPPPPPLPPNMVPQSVGGGRRDEDADRRYGATRHSQRLSPRHEEKERRRSEEAVVSQDDAKRRKEDDFRDRKREEREALSLKVEERDRERERDREKTNLLKEELDLNAASKRRKLKREHLPAGEPGEYSPVAPPPPPLGIGVSQAYDGRDRVDRKGPMIQHANYIDEPGLRIHGKEVASKLNRRDSDPMYDREWDDEKRQRADQKRRHRK* 1877
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g4979 1876 MobiDBLite consensus disorder prediction 1343 1359 - -
Amo13g4979 1876 Pfam Transcription- and export-related complex subunit 592 667 IPR021726 -
Amo13g4979 1876 Coils Coil 942 962 - -
Amo13g4979 1876 MobiDBLite consensus disorder prediction 1296 1342 - -
Amo13g4979 1876 Pfam Transcription factor/nuclear export subunit protein 2 919 1213 IPR021418 -
Amo13g4979 1876 MobiDBLite consensus disorder prediction 1837 1868 - -
Amo13g4979 1876 Coils Coil 1735 1755 - -
Amo13g4979 1876 MobiDBLite consensus disorder prediction 1685 1789 - -
Amo13g4979 1876 PANTHER THO2 PROTEIN 11 1783 IPR040007 GO:0000347|GO:0006397|GO:0006406
Amo13g4979 1876 MobiDBLite consensus disorder prediction 1475 1503 - -
Amo13g4979 1876 MobiDBLite consensus disorder prediction 1837 1876 - -
Amo13g4979 1876 MobiDBLite consensus disorder prediction 1283 1810 - -
Amo13g4979 1876 Coils Coil 1519 1539 - -
Amo13g4979 1876 MobiDBLite consensus disorder prediction 1392 1444 - -
Amo13g4979 1876 PANTHER THO COMPLEX SUBUNIT 2 11 1783 - -
Amo13g4979 1876 Coils Coil 970 1004 - -
Amo13g4979 1876 MobiDBLite consensus disorder prediction 413 432 - -
Amo13g4979 1876 Pfam THO complex subunit 2 N-terminus 37 417 IPR032302 -
Amo13g4979 1876 Pfam THO complex subunit 2 N-terminus 436 590 IPR032302 -
Amo13g4979 1876 MobiDBLite consensus disorder prediction 1504 1662 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g4979 Amo-Chr13 148796283 148812902 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g4979 13 148796283 148812902 Amo13g4979 13 148796283 148812902 ECH