Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g4971 ATGGTGTCAAGATCTTATTCAAATCTACTGGAGCTGGCATCGGGTGAGTCTCCATCATTTGGGACCATGAACAGGAGAATCCCTCGGATTATGACTGTGGCTGGTTTGATATCCGATGTTGATGATGACCGTGCTGAGAGTGTGTGCTCTGACCCCTCTTCTTCCTCTGTCCACCGTGACAGGATCATCATTGTGGCTAATCAGCTTCCTATAAGGGTTCAGAGAAAGCCAGACGGTAACAGCAACTGGCTCTTCACTTGGGATGACAATTCACTTCTCCTTCAACTCAAAGATGGCTTAGGTGATGATGACACTGAGGTTATCTATGTTGGTTGCCTCAAAGAAGAAGTGCATCCAAATGAACAAGATGAGGTTTCTCAGATACTTCTTGAGACTTTCAAGTGTGTCCCTACTTTTCTCCCTCCTGATCTCTTTACCAGGTACTACCATGGCTTCTGCAAGCAACAGTTATGGCCACTGTTCCATTACATGCTGCCTTTGTCACCAGACCTTGGAGGCAGGTTCAATAGGTCACTGTGGCAGGCTTATGTATCTGTCAATAAAATCTTTGCAGATAGGATTATGGAAGTTATTAACCCTGAGGATGATTATGTCTGGATACATGATTATCATCTCATGGTGTTGCCAACTTTCTTGAGGAAGAGATTCAACAGAGTCAAACTTGGGTTTTTCCTACATAGTCCATTTCCTTCATCGGAAATATACAAGACATTGCCTATTAGGGAAGAACTCCTGAGAGCACTTTTGAATTCAGATTTGATTGGATTCCACACCTTTGACTATGCAAGGCATTTTCTCTCATGTTGTGGTAGGATGCTTGGTCTAACCTATGAGTCCAAAAGGGGTTATATTGGGATTGAGTATTATGGTAGAACTGTTAGTATCAAGATTCTTCCGGTTGGGATTCACTTGGGACAGCTTCAATCAGTTTTAAGCATGTCCAAGACTGAAGAGAAAGTTTCTGAGCTTATTACACAGTTTACTGATGAAGGCAAGATAATGTTACTTGGTGTTGATGACATGGACATCTTTAAGGGAATAAGTTTGAAGCTATTGGCAATGGAGCAGCTCCTGATTCAGCACCCTGAGTGGCAAGGAAAGGTTGTGTTGGTTCAGATAGCCAACCCTGCAAGGGGAAGAGGGAAGGATGTGAAGGAAGTGCAGGCCGAGACGAAGGCTACCGCGAAACGAATCAACGAAACCTTTGGGAAGCCAGGGTATGATCCTGTTATTCTTATTGAAGAGCCACTGAGGTTTTATGAGAGAGTTGCATACTATGTTGTTGCTGAGTGTTGTTTGGTGACTGCAGTGAGGGATGGAATGAATCTCATACCGTATGAATACATAATCAGTCGTCAAGGGAATGATGGGTTGGACAAAGTTTTGAGAGTAGCCTCCTCTCCAAAGAAAAGCATGCTGGTTGTGTCTGAGTTCATTGGTTGTTCGCCATCTTTGAGTGGCGCAATCAGAGTGAACCCTTGGAACATTGATGCTGTGGCAGATGCAATGGACTCTGCCCTTGAAATGGCTGATTCAGAGAAGCAGCTTCGGCATGAGAAGCATTATAGATATGTTAGTACTCATGATGTAGGTTACTGGGCGCGCAGCTTCTTGCAAGATTTGGAAAGGACTTGTGGTGATCACGTACGGCGAAGGTGGTGGGGGATTGGCTTTGGATTGAGTTTTAGAGTTGTGGCACTTGATCCTAACTTCAGGAAGCTCTCAATGGAGCACATAGTTTCGGCTTACAAGAGGACGACAACTCGGGCGATACTTCTTGATTATGATGGTACATTGATACCTCAGGCATCCATTGATAAGAGCCCAACAAGTAACTCCATTAAGATGCTTAACAGTTTGTGTAGGGATAAGGACAACATGGTGTTTCTCGTCAGTGCTAGAAGCCGAAAGAGGCTCGCAGAATGGTTTTCTCCTTGTGAGAGTCTTGTAATTGCTGCTGAGCATGGTTACTTTCTAAGATTGAAAAGAGATGCAGAATGGGAAACCTGTGGGCCTGCTATAGACTGTAGTTGGAAACAAATTGCAGAACCTGTAATGAAGCTTTATACAGAAACAACTGATGGATCCACCATTGAAGATAAGGAAACTGCACTTGTTTGGTGCTATGAGGATGCAGATCCTGATTTCGGATCATGCCAGGCTAAGGAACTTCTTGATCATCTGGAAAGCGTGCTTGCAAATGAACCGGTAACAGTCAAGAGCGGACAGAACAATGTTGAGGTTATACCACAGGGCGTAAGCAAGGGGCTCGTGGCGAAGCGGCTGCTTTCCATGATGCATGAGAAGGGAATGTCACCTGATTTTGTTTTGTGTATAGGAGATGATCGGTCGGACGAAGACATGTTCGAAGTAATCACCACTTCCATGGCTGGTTCTTCGGCAACACCCAGGGCTGAAGTATTTGCATGTACTGTTGGTAAAAAACCAAGCAAGGCTAAGTACTACCTTGATGATACCGCTGAAATAGTGAGATTGGTGCATGGCTTGGCTTCTGTTTCGGAACAAAAAGTGTTACTCTAG 2562 0.4434 MVSRSYSNLLELASGESPSFGTMNRRIPRIMTVAGLISDVDDDRAESVCSDPSSSSVHRDRIIIVANQLPIRVQRKPDGNSNWLFTWDDNSLLLQLKDGLGDDDTEVIYVGCLKEEVHPNEQDEVSQILLETFKCVPTFLPPDLFTRYYHGFCKQQLWPLFHYMLPLSPDLGGRFNRSLWQAYVSVNKIFADRIMEVINPEDDYVWIHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIREELLRALLNSDLIGFHTFDYARHFLSCCGRMLGLTYESKRGYIGIEYYGRTVSIKILPVGIHLGQLQSVLSMSKTEEKVSELITQFTDEGKIMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETKATAKRINETFGKPGYDPVILIEEPLRFYERVAYYVVAECCLVTAVRDGMNLIPYEYIISRQGNDGLDKVLRVASSPKKSMLVVSEFIGCSPSLSGAIRVNPWNIDAVADAMDSALEMADSEKQLRHEKHYRYVSTHDVGYWARSFLQDLERTCGDHVRRRWWGIGFGLSFRVVALDPNFRKLSMEHIVSAYKRTTTRAILLDYDGTLIPQASIDKSPTSNSIKMLNSLCRDKDNMVFLVSARSRKRLAEWFSPCESLVIAAEHGYFLRLKRDAEWETCGPAIDCSWKQIAEPVMKLYTETTDGSTIEDKETALVWCYEDADPDFGSCQAKELLDHLESVLANEPVTVKSGQNNVEVIPQGVSKGLVAKRLLSMMHEKGMSPDFVLCIGDDRSDEDMFEVITTSMAGSSATPRAEVFACTVGKKPSKAKYYLDDTAEIVRLVHGLASVSEQKVLL* 854
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g4971 853 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 1 850 IPR001830 GO:0003824|GO:0005992
Amo13g4971 853 TIGRFAM T6PP: trehalose-phosphatase 595 843 IPR003337 GO:0003824|GO:0005992
Amo13g4971 853 SUPERFAMILY HAD-like 596 841 IPR036412 -
Amo13g4971 853 CDD GT20_TPS 61 549 IPR001830 GO:0003824|GO:0005992
Amo13g4971 853 Gene3D - 724 852 IPR023214 -
Amo13g4971 853 Gene3D - 595 723 IPR023214 -
Amo13g4971 853 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 598 801 IPR006379 -
Amo13g4971 853 Gene3D Glycogen Phosphorylase B; 317 533 - -
Amo13g4971 853 Pfam Glycosyltransferase family 20 61 549 IPR001830 GO:0003824|GO:0005992
Amo13g4971 853 CDD HAD_TPP 597 838 - -
Amo13g4971 853 Gene3D Glycogen Phosphorylase B; 53 316 - -
Amo13g4971 853 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 60 551 - -
Amo13g4971 853 PANTHER ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE [UDP-FORMING] 6 1 850 - -
Amo13g4971 853 Pfam Trehalose-phosphatase 599 833 IPR003337 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g4971 Amo-Chr13 148707741 148712019 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g4971 1 849 Trehalose Biosynthesis Gene Families AT1G68020 80.765 0.0 1466
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g4971 13 148707741 148712019 Amo13g4971 13 148707741 148712019 ECH