Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g4960 ATGGCGACCATGACGAGCTTGATCGGTCTTATCAATAAGATCCAGCGGGCCTGCACGGTGCTCGGAGATCACGGCGGCGAGGGCATGTCCCTCTGGGAGGCTCTTCCCTCCGTCGCCGTCGTCGGAGGACAGAGTTCAGGAAAATCCTCAGTGTTGGAAAGCGTGGTCGGTAGGGATTTCCTACCTCGCGGATCTGGTATTGTTACGCGGAGACCGCTGGTGCTGCAACTTCATAAGACAGAGGATGGCCAGGAATACGCCGAGTTTCTTCACTTACCGCGAAAGAGATTCACTGACTTCGCTGCTGTGAGGAAGGAAATTTCAGATGAAACAGATCGCATAACCGGGAAGACGAAACAAATTTCTAACATTCCAATTCAACTCAGCATTTATTCGCCACATGTTGTAAACTTAACCCTTATAGATCTTCCTGGGTTGACAAAGGTTGCAGTAGAGGGACAACCAGACACTATTGTTCAAGATATTGAAAACATGGTCCGTTCGTATGTTGAGAAGCCAAATTGCATTATCTTGGCTATCTCTCCTGCAAATCAAGATATTGCCACTTCAGATGCTATAAAAATTGCTAGAGAAGTTGATCCATCAGGTGAACGGACATTTGGAGTGGTTACCAAACTTGATCTTATGGATAAAGGAACTAATGCCGTTGATGTCCTTGAGGGAAGGCAATACAGACTGCAGCATCCATGGGTTGGAATTGTGAACCGTTCACAAGCGGATATTAACAGAAATGTTGACATGATTGCTGCTCGTAGGAAGGAGCGTGAGTATTTTGAGACAAGTCCTGAATATGGACATTTGGCACATAAAATGGGCTCAGAGTATCTAGCTAAGCTTCTATCTCAGCATTTGGAGCAAGTTATCAGACAGAAGATCCCCAGTATCATTGCCTTAATAAATAAGACGATAGACGAGCTTAATGCAGAGTTGGATCGTATAGGCAGGCCCATTGCTGTGGACTCAGGGGCCCAACTATACACTATTTTAGAGATGTGTCGTGCGTTTGACAAAGTATTTAAGGAACACCTGGACGGAGGACGTCCTGGTGGAGACCGGATATATGGAGTTTTTGATAATCAATTACCAGCTGCTTTAAAAAAACTTCCATTCGATCGTCATCTCGCCTTGAAAAATGTCCAGAGAGTTGTCACTGAAGCTGATGGGTATCAGCCCCATCTGATTGCCCCAGAGCAGGGTTATAGAAGACTCATTGAAGGGTCTATTGGCTATTTCAAAGGCCCAGCTGAAGCCTCTGTGGATGCCGTACACTTCGTTTTGAAGGAACTTGTACGGAAGTCAATTTCTGAAACTGAGGAATTAAAAAGATTTCCAACACTTGCAAATGATATAGCAACTGCTGCAAACGAAGCTTTGGAAAGATTTCGCGAAGAAAGCAGGAAGACAGTTATACGATTGGTTGATATGGAGTCTAGCTATCTAACAGTAGAATTTTTCAGGAAGATTCATCTAGAAGGAGAAAGGGGTCCAAATGCGCCAAATTCAAATCGTAATGATAAGAATGATCGGAGTGAACGTAATGCTCCCAATCCCGCAATGGACAATCCTGACTATCACCTCCGGAAGATTGGATCAAATGTTAATGCCTATATCAACATGGTTTGCGATTCGCTTAAGAATTCTATACCAAAGGCCGTGGTATATTGTCAAGTTAGAGAGGCCAAGAGATCATTGCTTAACTACTTTTATGTTCAAGTTGGGAAGAAGGAGAAAGAGAAATTGGGCGCCATGTTGGATGAAGATCCAGCTCTGATGGAAAAGAGAAATCAACTTGCTAAAAGGCTTGAATTGTACAAGCAAGCTAGGGATGACATTGATTCCGTGGCCTGGAGATCATGA 1878 0.4414 MATMTSLIGLINKIQRACTVLGDHGGEGMSLWEALPSVAVVGGQSSGKSSVLESVVGRDFLPRGSGIVTRRPLVLQLHKTEDGQEYAEFLHLPRKRFTDFAAVRKEISDETDRITGKTKQISNIPIQLSIYSPHVVNLTLIDLPGLTKVAVEGQPDTIVQDIENMVRSYVEKPNCIILAISPANQDIATSDAIKIAREVDPSGERTFGVVTKLDLMDKGTNAVDVLEGRQYRLQHPWVGIVNRSQADINRNVDMIAARRKEREYFETSPEYGHLAHKMGSEYLAKLLSQHLEQVIRQKIPSIIALINKTIDELNAELDRIGRPIAVDSGAQLYTILEMCRAFDKVFKEHLDGGRPGGDRIYGVFDNQLPAALKKLPFDRHLALKNVQRVVTEADGYQPHLIAPEQGYRRLIEGSIGYFKGPAEASVDAVHFVLKELVRKSISETEELKRFPTLANDIATAANEALERFREESRKTVIRLVDMESSYLTVEFFRKIHLEGERGPNAPNSNRNDKNDRSERNAPNPAMDNPDYHLRKIGSNVNAYINMVCDSLKNSIPKAVVYCQVREAKRSLLNYFYVQVGKKEKEKLGAMLDEDPALMEKRNQLAKRLELYKQARDDIDSVAWRS* 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g4960 625 ProSiteProfiles Dynamin-type guanine nucleotide-binding (G) domain profile. 32 300 IPR030381 GO:0005525
Amo13g4960 625 Gene3D Dynamin, middle domain 333 601 - -
Amo13g4960 625 MobiDBLite consensus disorder prediction 500 530 - -
Amo13g4960 625 PANTHER BNAA09G45430D PROTEIN 4 623 - -
Amo13g4960 625 SMART dynamin_3 4 251 IPR001401 GO:0003924|GO:0005525
Amo13g4960 625 CDD DLP_1 35 300 IPR001401 GO:0003924|GO:0005525
Amo13g4960 625 PRINTS Dynamin signature 35 53 IPR022812 -
Amo13g4960 625 PRINTS Dynamin signature 201 217 IPR022812 -
Amo13g4960 625 PRINTS Dynamin signature 224 243 IPR022812 -
Amo13g4960 625 PRINTS Dynamin signature 60 77 IPR022812 -
Amo13g4960 625 PRINTS Dynamin signature 132 149 IPR022812 -
Amo13g4960 625 PRINTS Dynamin signature 182 200 IPR022812 -
Amo13g4960 625 PANTHER DYNAMIN 4 623 IPR022812 -
Amo13g4960 625 Pfam Dynamin central region 221 488 IPR000375 -
Amo13g4960 625 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 6 308 IPR027417 -
Amo13g4960 625 SMART GED_2 528 621 IPR003130 GO:0003924|GO:0005525
Amo13g4960 625 Gene3D - 4 309 IPR027417 -
Amo13g4960 625 ProSiteProfiles GED domain profile. 533 625 IPR020850 -
Amo13g4960 625 Pfam Dynamin GTPase effector domain 531 621 IPR003130 GO:0003924|GO:0005525
Amo13g4960 625 Pfam Dynamin family 38 212 IPR045063 -
Amo13g4960 625 ProSitePatterns Dynamin-type guanine nucleotide-binding (G) domain signature. 61 70 IPR019762 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g4960 Amo-Chr13 148627133 148633269 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g4960 13 148627133 148633269 Amo13g4960 13 148627133 148633269 ECH