Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g4947 ATGGGTTCCGAAGGATCAAGTGTTGTTGTTCCTAGGAATTTCAGATTATTGGAAGAGCTTGAGAGAGGTGAGAAGGGAATTGGAGATGGAACTGTAAGCTATGGAATGGATGATGCTGATGATATCTACATGCAATCATGGACTGGGACAATTATAGGTCCCCCTGGTACTGTCCACGAAGGGCGTATCTACCAATTGAAATTGTTTTGTGGTAAGGATTATCCAGACAATCCACCATCTGTTAGATTTCAGACAAGGATTAACATGACTTGCGTCAACCAAGAGACTGGAGTGGTTGAACCACAATTGTTTCCCATGCTTGCTAATTGGCAAAGAGAGTGTACGATGGAAGACATTTTATTGCAATTGAAGAAAGAAATGTCGTCTCCACAGAACAGGAAGCTAGCTCAGCCTCCTGAAGGAAACGAAGAAGGAAGGATTGATCAGAAGGGGCTGGTGGTGAAATGTTGTATTGTGTAA 480 0.4271 MGSEGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMQSWTGTIIGPPGTVHEGRIYQLKLFCGKDYPDNPPSVRFQTRINMTCVNQETGVVEPQLFPMLANWQRECTMEDILLQLKKEMSSPQNRKLAQPPEGNEEGRIDQKGLVVKCCIV* 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g4947 159 Pfam Ubiquitin-conjugating enzyme 41 136 IPR000608 -
Amo13g4947 159 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 11 159 IPR000608 -
Amo13g4947 159 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 VARIANT 1A-LIKE 8 144 - -
Amo13g4947 159 SUPERFAMILY UBC-like 9 142 IPR016135 -
Amo13g4947 159 Gene3D Ubiquitin Conjugating Enzyme 2 144 IPR016135 -
Amo13g4947 159 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 8 144 - -
Amo13g4947 159 SMART ubc_7 14 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g4947 Amo-Chr13 148507193 148510068 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g4947 13 148507193 148510068 Amo13g4947 13 148507193 148510068 ECH