Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g4137 ATGGCTCTCTCTCTATCGCTCCTGGCCCTCATTGTCTTTTCTCTCTCCTCACAGTTACTCCCTTCCTCTTCTTATTCCGTACCGGTGGACACCTTCGTTTATGGCGGCTGCACGCAACAAAGGTATAATCCAACCTCGCCGTACGAGTCAAACCTCAACTCGCTACTTGGCTCGCTGGTCAACTCAGCCACATTCTCCGCCTACAACAACCTCACCGTCCTTTCATCTTCGCAAAGTGGCGTCGCCTACGGTCTATACCAGTGCCGAGGCGACCTCGCCATGCAAGACTGCGCCACCTGCGTCGCACGTGCCGTCTCACGAGCTGGCGAGCTCTGTCCAGGAGCGTGCGGCGGCGCCGTCCAGCTCGACGGCTGCTTCGTCAAGTACGACAACGTCGCGTTCCTTGGGGTGGAGGACAAGTCGCTGGTACTGAGGAAGTGCGGCTCGCATTCGGCCGGGTGCGATCCGGAAGCGGTTATGGTTGGGTTGGCGGGTTCGGGAGGGTATTTTCGGGTTGGAGGTTCGGGTCGGCTGAAGGGTGTGGCTCAGTGCACGGGGGATCTCAGTGCGGCGGAGTGCCAGGATTGCGTTGGGGAGGCGGTGCGGCGGCTGAGGAGTGATTGCGCCGCCTCCGATTACGGGGACGTGTTTCTGGGGAAGTGCTACGCCAGGTTCTCGACCGGTGGGGCCCATGGGGGGTACTACAACTCAAAAGCCCATGGTAGATCGGACAATGAAGGTGAGAAGACATTTGCAATAATTATTGGATTATTAGCAGGTGTAGCTTTACTCATTATTTTCCTTGCTTTCTTGAGGAGAATTTGTGAAGGACAAGAATTTAACCAAGAGTTCGATTTCACGAGAATATCAAGCCCCTTATATTCATACCAATATCCGTAA 900 0.5544 MALSLSLLALIVFSLSSQLLPSSSYSVPVDTFVYGGCTQQRYNPTSPYESNLNSLLGSLVNSATFSAYNNLTVLSSSQSGVAYGLYQCRGDLAMQDCATCVARAVSRAGELCPGACGGAVQLDGCFVKYDNVAFLGVEDKSLVLRKCGSHSAGCDPEAVMVGLAGSGGYFRVGGSGRLKGVAQCTGDLSAAECQDCVGEAVRRLRSDCAASDYGDVFLGKCYARFSTGGAHGGYYNSKAHGRSDNEGEKTFAIIIGLLAGVALLIIFLAFLRRICEGQEFNQEFDFTRISSPLYSYQYP* 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g4137 299 PANTHER PLASMODESMATA-LOCATED PROTEIN 5 4 276 - -
Amo13g4137 299 ProSiteProfiles Gnk2-homologous domain profile. 30 134 IPR002902 -
Amo13g4137 299 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 4 276 - -
Amo13g4137 299 Pfam Salt stress response/antifungal 175 227 IPR002902 -
Amo13g4137 299 Pfam Salt stress response/antifungal 37 131 IPR002902 -
Amo13g4137 299 Gene3D - 160 228 IPR038408 -
Amo13g4137 299 Gene3D - 29 134 IPR038408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g4137 Amo-Chr13 134727203 134729563 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g4137 4 225 Receptor kinase-like Gene Family AT4G05200 26.033 1.39e-13 69.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g4137 13 134727203 134729563 Amo13g4137 13 134727203 134729563 ECH