Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g4136 ATGGTGGCTTTAGTTTCCCAGGAAAATGTCGTCGCATTGGTTTCTCGTACCGGTCGGGAGTTACAGCGTTACAGAAAAGGTCGTCGCCAAGTTGTGGGATGCATACCATATAGATATAAGATTGAGGAGAAAACTTGGTTGGGCGATTTAGACGAATTGGAAGTTCTGGTTATTAGTTCTCAGAAAGGCAAAGGAATGCTATTCCCAAAGGGAGGGTGGGAACTTGATGAATCCAAAAAGGAGGCAGCTTTGCGAGAGACCATAGAGGAAGCTGGGGTGCGAGGCATTGTTGGGGGTAAATTGGGGAAATGGAGCTTCAAGAGCAAAACCCATGATACCTTCTATGAAGGGTACATGTTCCCACTTCTTGTTGAAGAGCAACTTGAGTTCTGGCCAGAGCAGAACGTTCGTCAAAGAACATGGATGAGTGTATCTGAGGCAAGAGAAGTTTGTCAACACTGGTGGATGAAGGAAGCACTAGACAGACTTGTAAACCGTCTCACGGGTCAAAAACTACTTGGTCGTGAAACAAAGCAAGTTCTAAGTTGCATAGCATCAGATATGTCCAATTGCCAAATCTGA 582 0.4519 MVALVSQENVVALVSRTGRELQRYRKGRRQVVGCIPYRYKIEEKTWLGDLDELEVLVISSQKGKGMLFPKGGWELDESKKEAALRETIEEAGVRGIVGGKLGKWSFKSKTHDTFYEGYMFPLLVEEQLEFWPEQNVRQRTWMSVSEAREVCQHWWMKEALDRLVNRLTGQKLLGRETKQVLSCIASDMSNCQI* 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g4136 193 PANTHER DIPHOSPHOINOSITOL POLYPHOSPHATE PHOSPHOHYDROLASE 6 172 - -
Amo13g4136 193 CDD Nudix_Hydrolase_9 30 157 - -
Amo13g4136 193 PANTHER NUDIX HYDROLASE-LIKE PROTEIN 6 172 - -
Amo13g4136 193 Pfam NUDIX domain 54 161 IPR000086 -
Amo13g4136 193 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 14 167 - -
Amo13g4136 193 ProSiteProfiles Nudix hydrolase domain profile. 27 164 IPR000086 -
Amo13g4136 193 SUPERFAMILY Nudix 21 167 IPR015797 -
Amo13g4136 193 ProSitePatterns Nudix box signature. 71 92 IPR020084 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g4136 Amo-Chr13 134715814 134717407 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g4136 13 134715814 134717407 Amo13g4136 13 134715814 134717407 ECH