Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g2313 ATGTCCATTATGCTTCCTCCCTTAACTCATATTTCTAACACGAATTCGCTGCTGCTCCTGAGCAATGTTGGTGATTGTGCTTGTGCAATTTGTCCCCGAGTAACACTTAAAGTACAACCTCAAGTGTCTGTGGTGAAGACTGAAGTCCCTAAATCAACATTATTTGTTTGTTCATCTCAAAGGGTTTTACCAGTTCAGGAGCTGCATATAATAAGTGCTGATGACGAAGAATCAGTGGGCGTTGAAGAATACAATCAGTCAAAAGTTAATATTGATTCGTTGGAATTGAGTTATGTGAACAACGGGAATGAGGCTGGTGGCCTTAGTGACTTTGTAGAACCTCAGAACAAAGAAATTCTTAAGGAGAGGATCAGAAGAATGAGAATAGGACTAGCCAACAAAGGAAGAGTACCTTGGAACAAAGGAAGGAAACACACTGCAGAGACCCGTGAGCGAATCAGGATAAGAACGTTAGAGGCATTAAGGGATCCAAAGATACGGAAGAAGATGGCTGAACATCCTCATTTTCATAGTGATCAAATCAAGGCAAAAATAAGTTATTCGCTGAGACGTGTTTGGCAAGAGCGTCTGAAGTCAAGGCGGTTGGGGGAGAATTTTTTGCTTTCATGGCAACAAGGCATAGCAAATGCTGCTAGGAAGGGAGCAAGTGATCAAGAAGAACTAGATTGGGATAGCTACAGTAAGATAGAACAACAATTGGAGGTCCTCCAACTTCTTCAGGCCAAGGAAAAGAAAAAGGGGAAAAAGTTGATGGCGATTGCTGCAGCAAGGAATTTCATTCAGTCATGGAGGGAATGCATAGCCACAGCAGCTAAGAAAGGAGGGAGTGGTGAACAAGAACTAGAATGGGGGAGCTATCAGAAGATAAAACAAGAAATGGTTCTCCTCTATAAGCTTCAATGTGCATCAGAAAAAGCAAGGGCAAAAGAGTTCGCAAGAGTAAAAGCAGAGAAAGCTGCACGGATAAAGGCAATAAGGAAGGCAATGCTTGCTGAAAAGAGGAAAGAACATCAGGAGAGGACAAAAGCGAAGGGGGATATGAAGATCCGGCAATCTAGAAAAGGAAAGCAAGACAATATTGATTCTGAAGTTACTAAAGAGTTCAAACTTGCCTGTAAATTAACGAAGATTCCTGTAAATAAGAATATCATCAGCAGTCAAGTATCTAGAGAAGGAGATGTTTTCAATTCAATTTTCCCAACTTACAATAAATTGGATATAGAGCTTATCAAGAGAGAAAAGTTGCAGAAAGGAGTATCACTTGCGGATCAGATCAAAGCTGCTAGGGACAGAAAAGCCGAACTACACTGA 1332 0.4114 MSIMLPPLTHISNTNSLLLLSNVGDCACAICPRVTLKVQPQVSVVKTEVPKSTLFVCSSQRVLPVQELHIISADDEESVGVEEYNQSKVNIDSLELSYVNNGNEAGGLSDFVEPQNKEILKERIRRMRIGLANKGRVPWNKGRKHTAETRERIRIRTLEALRDPKIRKKMAEHPHFHSDQIKAKISYSLRRVWQERLKSRRLGENFLLSWQQGIANAARKGASDQEELDWDSYSKIEQQLEVLQLLQAKEKKKGKKLMAIAAARNFIQSWRECIATAAKKGGSGEQELEWGSYQKIKQEMVLLYKLQCASEKARAKEFARVKAEKAARIKAIRKAMLAEKRKEHQERTKAKGDMKIRQSRKGKQDNIDSEVTKEFKLACKLTKIPVNKNIISSQVSREGDVFNSIFPTYNKLDIELIKREKLQKGVSLADQIKAARDRKAELH* 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g2313 443 Pfam NUMOD3 motif 128 154 IPR003611 GO:0003677
Amo13g2313 443 MobiDBLite consensus disorder prediction 338 367 - -
Amo13g2313 443 PANTHER NUMOD3 MOTIF FAMILY PROTEIN, EXPRESSED 265 443 - -
Amo13g2313 443 PANTHER NUMOD3 MOTIF FAMILY PROTEIN, EXPRESSED 6 263 - -
Amo13g2313 443 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-79 SPECIFIC-LIKE PROTEIN 6 263 - -
Amo13g2313 443 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-79 SPECIFIC-LIKE PROTEIN 265 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g2313 Amo-Chr13 39899147 39903832 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g2313 13 39899147 39903832 Amo13g2313 13 39899147 39903832 ECH
Amo13g2313 13 39899147 39903832 Amo03g0167 03 2972396 2976077 hybridization