Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g1630 AAGTTAGTCACAGTGGTCTTGTCTCTTAAAAACGTGAAAGGAATCTCTAAACACCACTTACTTGTTTTTTGTTTCTTCTTCTACTCTCATCACCACGCACAACACACAACCTTTTTCTTCTTTTACCTTCCTCTCAACTCAGCTATGGCTGCAAGAGAAATCCTCCATAAGATGAAGGAAAAAGTTGGGCTGCGTTCGTCGGAACCTGACTCGGGGAAAGGAAAGAGCAAGATTTCAAGGCGTGTAACTCATGGATTTCACTTAGTAAAGGGAAGATCATACCATGCCATGGAGGATTTTGTTGTTGCTGAATTTAAGCAAGTTGATAGCAATGAACTTGGCTTGTTTGCGATATTCGATGGCCATGCCGGTCACAATGTGCCTAATTACTTGCGGTCTCACTTGTTTGAAAACATCTTAAAAGAGCCTGACTTCTGGAAAGATCCTGAAAATGCTGTCAGGAGAGCCTATAGTATAACCGATTCTAGCATTTTGGAGAAATCAGGCGAACTGGGTAGAGGGGGTTCAACTGCTGTTACTGCAATATTGATGAATTGTCAGAAGTTAGTCATAGCTAATATTGGTGATTCTCGGGCCGTCTTATGCAAGAAAGGCCTTGCCAAACAACTATCGGAGGATCATGAGCCACACAAGAAAAATGAATCCTCTGTCACCAATTCAGGCGACGTTCCAAGGGTTGATGGCCGGTTGGCAGTATCAAGGGCATTTGGTGACAAAAGTCTGAAGAAACACTTGAGTTCAGAACCACATGTGACAGTGGAGCTTGTACAAGATGATGTAGAATTCCTCATATTAGCAAGTGATGGATTATGGAAGGTAATGACAAATCAAGAAGCAGTTAATACCATCAAAGACATAAAGGATGCTCGGTCTTCGGCGAAACGCCTTACTGAAGAAGCACTTAACAGGAAAAGCACAGATGATATATCCTGCATTGTTGTGAAATTTCAGTGA 975 0.4205 KLVTVVLSLKNVKGISKHHLLVFCFFFYSHHHAQHTTFFFFYLPLNSAMAAREILHKMKEKVGLRSSEPDSGKGKSKISRRVTHGFHLVKGRSYHAMEDFVVAEFKQVDSNELGLFAIFDGHAGHNVPNYLRSHLFENILKEPDFWKDPENAVRRAYSITDSSILEKSGELGRGGSTAVTAILMNCQKLVIANIGDSRAVLCKKGLAKQLSEDHEPHKKNESSVTNSGDVPRVDGRLAVSRAFGDKSLKKHLSSEPHVTVELVQDDVEFLILASDGLWKVMTNQEAVNTIKDIKDARSSAKRLTEEALNRKSTDDISCIVVKFQ* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g1630 324 ProSiteProfiles PPM-type phosphatase domain profile. 83 323 IPR001932 -
Amo08g1630 324 SMART PP2C_4 73 321 IPR001932 -
Amo08g1630 324 CDD PP2Cc 90 323 IPR001932 -
Amo08g1630 324 SMART PP2C_SIG_2 97 323 IPR001932 -
Amo08g1630 324 Pfam Protein phosphatase 2C 95 316 IPR001932 -
Amo08g1630 324 Gene3D - 78 324 IPR036457 -
Amo08g1630 324 PANTHER PROTEIN PHOSPHATASE 2C 39-RELATED 49 324 - -
Amo08g1630 324 PANTHER PROTEIN PHOSPHATASE 2C 49 324 IPR015655 GO:0004722|GO:0006470
Amo08g1630 324 ProSitePatterns PPM-type phosphatase domain signature. 115 123 IPR000222 GO:0043169
Amo08g1630 324 MobiDBLite consensus disorder prediction 210 232 - -
Amo08g1630 324 SUPERFAMILY PP2C-like 80 323 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g1630 Amo-Chr8 26836978 26839144 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g1630 49 324 PP2C-type Phosphatase Gene Family AT3G15260 67.820 1.66e-144 407
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g1631 18 32443099 32445606 Amo08g1630 08 26836978 26839144 hybridization
Amo08g1630 08 26836978 26839144 Amo13g2392 13 41719216 41724885 PCT
Amo13g2392 13 41719216 41724885 Amo08g1630 08 26836978 26839144 PCT