Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01479 ATGGCTGCAAGAGAAATCCTCCATAAGATGAAGGAAAAAGTTGGGCTGCGTTCATCGGAACCTGACTCAGGGAAAGGAAAGAGCAAGATTTCAAGGCGTGTAACTCATGGATTTCACTTAGTAAAGGGAAGATCATACCATGCCATGGAGGATTTTGTTGTTGCTGAATTTAAGCAAGTTGATAGCAATGAACTAGGCTTGTTTGCGATATTCGATGGCCATGCCGGTCACAATGTGCCTAATTACTTGCGGTCTCACTTGTTTGAAAACATCTTAAAAGAGCCTGACTTCTGGAAAGATCCTGAAAATGCTGTCAGGAGAGCCTATAGTATAACCGATTCTAGCATTTTGGAGAAATCAGGTGAACTGGGTAGAGGGGGTTCAACTGCTGTTACTGCAATATTGATGAATTGTCAGAAGTTAGTCATAGCTAATATTGGTGATTCTCGGGCCGTCTTATGCAAGAAAGGCCTTGCCAAACAACTATCGGAGGATCATGAGCCACACATAGAAAGTGAAGATATAAAAAATAGAGGTGGTTTTGTGTCAAAATTTCCAGGCGACGTTCCAAGGGTTGATGGCCGGTTGGCAGTATCAAGGGCATTTGGTGACAAAAGTCTGAAGAAACACTTGAGTTCAGAACCACATGTGACAGTGGAGCTTGTACAAGATGATGTAGAATTCCTCATATTAGCAAGTGATGGATTATGGAAGGTAATGACAAATCAAGAAGCAGTTAATACCATCAAAGACATAAAGGATGCTCGGTCTTCGGCGAAACGCCTTACTGAAGAAGCACTTAACAGGAAAAGCACAGATGATATATCCTGCATTGTTGTGAAATTTCAGTGA 852 0.4178 MAAREILHKMKEKVGLRSSEPDSGKGKSKISRRVTHGFHLVKGRSYHAMEDFVVAEFKQVDSNELGLFAIFDGHAGHNVPNYLRSHLFENILKEPDFWKDPENAVRRAYSITDSSILEKSGELGRGGSTAVTAILMNCQKLVIANIGDSRAVLCKKGLAKQLSEDHEPHIESEDIKNRGGFVSKFPGDVPRVDGRLAVSRAFGDKSLKKHLSSEPHVTVELVQDDVEFLILASDGLWKVMTNQEAVNTIKDIKDARSSAKRLTEEALNRKSTDDISCIVVKFQ 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01479 283 PANTHER PROTEIN PHOSPHATASE 2C 1 283 IPR015655 GO:0004722|GO:0006470
Aip08g01479 283 SUPERFAMILY PP2C-like 32 282 IPR036457 -
Aip08g01479 283 SMART PP2C_4 25 280 IPR001932 -
Aip08g01479 283 CDD PP2Cc 42 282 IPR001932 -
Aip08g01479 283 Gene3D - 30 283 IPR036457 -
Aip08g01479 283 Pfam Protein phosphatase 2C 47 275 IPR001932 -
Aip08g01479 283 ProSiteProfiles PPM-type phosphatase domain profile. 35 282 IPR001932 -
Aip08g01479 283 ProSitePatterns PPM-type phosphatase domain signature. 67 75 IPR000222 GO:0043169
Aip08g01479 283 PANTHER PROTEIN PHOSPHATASE 2C 39-RELATED 1 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01479 Aip-Chr8 24798308 24800747 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g01479 1 283 PP2C-type Phosphatase Gene Family AT3G15260 70.242 3.30e-158 440
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g01479 08 24798308 24800747 Aip08g01479 08 24798308 24800747 ECH
Aip08g01479 08 24798308 24800747 Aip03g02139 03 31583334 31588902 PCT