Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04861 ATGGCAATGCCATCGGGAAATGTGGTAGCACAGGACAAAATGCAGTTTCCTAGTGGTGGTGGTGGTGGTGCCGGTGCCGGCAGTGGCAGTGCTGGCGGTGAGATCCACTACCGCCAGCAATGGTTTGTTGATGAGAGGGATAGCCTTATTGGCTGGCTGCGAAGCGAATTCGCAGCTGCCAATGCGATCATAGACTCCCTTTGTCACCATTTACGTATAGTTGGTGACCCTGGAGAGTATGATATGGTCGTTGGTGCCATTCAGCAAAGGAGGTGTAATTGGAATCAGGTGCTGCTTATGCAGCAATACTTTTCGGTCTCTGAAGTGGTTTATGCGCTGCAGCAAGTGGCGTGGAGGAGGCAGCAGAGGTATGTGGAGCCGGTTAAAGTGGGTGCAAAGGAAGTTAGGAAATCTGGTCCAGGGTACAGGCAAGGGCAGAGGTTTGAGTCTGCAAAGGAAAGTTTTAATGCTAGTGTAGAGTCTTATAGTCATGAGGCAAATAGCGCAATTACCGGATCCCCCGAGAAAGGGACTCCATTAACTGAAAAGGGTGAAGAACTTAAATCTGCTGGTAAGGTTGGAAAGATAGATGATAAGAGTTTAGCATCCACTGAGGAGAAGAAAGATGCTATAGCAAAGAATCAGACAGAGGGCAACTTGAAGGGCTCAGGGAGCTCACAAGGATCCCTGCCAAATTCGGATTCTGAAGCTGGGGTCGTAAATGACGGACTTGCATCAAATTTTAAAGGGAATGAGTCACTTTCTATCCAAAATCAGAATCAGAGTCAAAGTCTTTCAACATTAGCAAAAACTTTTGTTGGCAATGAAATGTTTGATGGGACGATGGTGAATGTGGCTGATGGACTAAAGTTGTATGAAGAGTTATTTGATGGCACTGAAGTTTCAAAACTTGTTTCACTGGTCAATGATCTAAGGATTTCGGGAAAAAGAGGACAATTTCAAGGGAGTCAGACATTTGTGGTTTCGAGGAGGCCCATGAAAGGGCATGGAAGGGAGATGATTCAGTTGGGTGTTCCTGTTGTTGATGCACCTCTAGAAGGAGAGAATATGACCGGAGCCTCAAGAGAAAAGAATGTAGAACCTATCCCTTCCTTGTTTCGAGAAATTATTGAGCGGATGGTTGCCTCACAAGTTATGACTGTGAAGCCTGATGCTTGTGTTGTGGATTTCTTTAATGAGGGTGATCATTCACAGCCCTACAATTGGCCGCACTGGTTTGGAAGGCCCGTTCATGTTCTCTTCCTGACAGAATGTGAAATCACTTTTGGGAGAGTGATCACCACGGATCATCCTGGGGATTATAGGGGCACTCTCAAGCTTTCTCTTTCCCCTGGGTCATTTCTGGCTATGCAAGGGAAATGCACTGATTTTGCCAAACATGCTATTCCTTCTTTCCGTAAACAACGCATCCTTGTTACTTTCATCAAGTCCCAACCGCGAAGGTCCCCCCCTTCGGATGCCCAGCGTCTTGCTTCGCCAGCAGTATCTTCTCATTGGGGTCCACCGCCAAGCCGATCCCCTAACCACATGCGTCATCATGTAGGTCCTAAGCATTATCCTGCAGGCCAGACAACTGGAGTTCTGCCAGCTCCACCCATCCGTCCGCAAATTCCGCCACCAAATGGTATGCAGCCGCTGTTTGTGGCTGCTCCAGTTGTCCCTGCCATGCCATTTCCTGCACCGGTACCAATCGCACCAGCTTCCACAGGATGGACAGCAGCCCCTCCAAGGCATCCCACTCCTCGAATCCCTGCGCCTGGCACAGGAGTCTTCCTCCCTCCACCCGGGTCAGGTAATCCTCCTCCACAAGTACTTGGTGCTTTGACCGAAGTGAACCCAGGTTCGGAAACTCCGACCACTCATGAAAAGGAAAATGGGAATTCTAATCATAACAACACAACTTCACCGAAAGGGAAAGTGCAGAGGCAAGAGTGCAATGGGCATGTGAATGGAACTGAAGAAGAGAAAGCTGTAGAGACAGAGCAAGATAGCAATGACAAAACTGTGGAAAGCCAATGA 2040 0.4828 MAMPSGNVVAQDKMQFPSGGGGGAGAGSGSAGGEIHYRQQWFVDERDSLIGWLRSEFAAANAIIDSLCHHLRIVGDPGEYDMVVGAIQQRRCNWNQVLLMQQYFSVSEVVYALQQVAWRRQQRYVEPVKVGAKEVRKSGPGYRQGQRFESAKESFNASVESYSHEANSAITGSPEKGTPLTEKGEELKSAGKVGKIDDKSLASTEEKKDAIAKNQTEGNLKGSGSSQGSLPNSDSEAGVVNDGLASNFKGNESLSIQNQNQSQSLSTLAKTFVGNEMFDGTMVNVADGLKLYEELFDGTEVSKLVSLVNDLRISGKRGQFQGSQTFVVSRRPMKGHGREMIQLGVPVVDAPLEGENMTGASREKNVEPIPSLFREIIERMVASQVMTVKPDACVVDFFNEGDHSQPYNWPHWFGRPVHVLFLTECEITFGRVITTDHPGDYRGTLKLSLSPGSFLAMQGKCTDFAKHAIPSFRKQRILVTFIKSQPRRSPPSDAQRLASPAVSSHWGPPPSRSPNHMRHHVGPKHYPAGQTTGVLPAPPIRPQIPPPNGMQPLFVAAPVVPAMPFPAPVPIAPASTGWTAAPPRHPTPRIPAPGTGVFLPPPGSGNPPPQVLGALTEVNPGSETPTTHEKENGNSNHNNTTSPKGKVQRQECNGHVNGTEEEKAVETEQDSNDKTVESQ 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04861 679 MobiDBLite consensus disorder prediction 617 654 - -
Aip03g04861 679 MobiDBLite consensus disorder prediction 584 608 - -
Aip03g04861 679 MobiDBLite consensus disorder prediction 179 214 - -
Aip03g04861 679 Gene3D - 273 489 IPR037151 -
Aip03g04861 679 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN-RELATED 1 668 IPR044842 GO:0003729|GO:0006402|GO:0032451
Aip03g04861 679 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN 1 668 - -
Aip03g04861 679 MobiDBLite consensus disorder prediction 578 679 - -
Aip03g04861 679 MobiDBLite consensus disorder prediction 165 244 - -
Aip03g04861 679 MobiDBLite consensus disorder prediction 485 499 - -
Aip03g04861 679 MobiDBLite consensus disorder prediction 483 546 - -
Aip03g04861 679 SUPERFAMILY Clavaminate synthase-like 281 481 - -
Aip03g04861 679 MobiDBLite consensus disorder prediction 216 244 - -
Aip03g04861 679 MobiDBLite consensus disorder prediction 655 679 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04861 Aip-Chr3 132852498 132858559 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g04861 03 132852498 132858559 Aip03g04861 03 132852498 132858559 ECH