Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04860 ATGGATGAGATTCAGAAACAGAAACGGGAAACTGAAAAGAAAGTAGGATTAGGAATGCGTGAGGTTTGCTGTGATTCGCAACACCCTCGTGTGATGGTCCCCAACTTCCTCTCCCCTGAAGAATGCAAGGAGCTGGAATTCATACACAAGAGTAGCAGCACTGTTGGCTATAGACCCAATGTCTTCTCAACCACTCTCTCCCATCTTGTTGCCACCAACGCTTCCCACTTCCTCATTCCCTTCATTCCCATCCGAGAAAGGTTGAAAGACAAGCTAGAGGAGTTTTTCAACTGTCAATACGAGCTCTTTGTTGAATTCACCGCTCTAATCAGGTTACTACTCTATCTTAAGGACCATCAATTGCTTGTTGGTTGTTGCTTCTTTTACAATCTTTTACCTTATTTTATTTATGAATCATCAAACAGCTGGAGCAGAGGTGCAAGTATTGGGTGGCATAGTGATGATAACAGACCCTACCTCAAACAGCGGCACTTTGCAGTGGTGTGCTATTTAAATAATTATGGCAAGGATTTCAATGGTGGACTTTTTCGTTTCCAGGATGGCCAGCCAATGTCAATTATGCCAATGGCTGGAGATGTTCTGATGTATACTGCTGACCAGCGTAACATTCATTCTGTTGATGAGATAACTGATGGAGAAAGACTAACGCTTACTTTATGGTTCACTCGTGATGGTTCCCATGATGAGGATGTGAAGCTTGTTTATCTCCTTTCACAACACCTATTACATAAGGACATGGCTGCATCGTATCTTCCTCTGCCTGCATCCTTTGATATGTATTGTTTTTCGCAGGATCAAGCTTCCAATGACCAGTTCGGTTTTAATATATGTTGGGCCAGACTTCATATTCTTGGATATGGCATTTCTATATCCGAAGACGGTGCCTGTGACTCAGATGTATCTGAATTACTGGTGAAGCCAGTCCAGTTAGTAAGAGGAGATGAGTTGTTAGACCATGAATTTGTCAATATTTTGCAGGCACTTCAGGTCGTCCATTTCTATTGTTGGCAAGGATCTGCCTTAAAGACCAAGGCATTGAATGTGCACACGAACGTGCTAAAACTTTCAGATAAGGACAAGGAGAGAATCAACTATCTGAAGTCTGTACTTTTGAATGATGAAGATTTGGTATTGAAGGTTTTTGGGAGTATGCCTTTGGAAGAAAATGGAGGCATTTGCTTTGACTGGACAGGAATTGTGGCTGCAATTGCTGCTTGGGAAGATTATGTGACGAAGTTAAGTAAACAAATTCATTTAGAGTTGCCTTATTGGAGAATGCATGAATCTATATATACGGTGCAACTTGATGAGTAG 1335 0.4165 MDEIQKQKRETEKKVGLGMREVCCDSQHPRVMVPNFLSPEECKELEFIHKSSSTVGYRPNVFSTTLSHLVATNASHFLIPFIPIRERLKDKLEEFFNCQYELFVEFTALIRLLLYLKDHQLLVGCCFFYNLLPYFIYESSNSWSRGASIGWHSDDNRPYLKQRHFAVVCYLNNYGKDFNGGLFRFQDGQPMSIMPMAGDVLMYTADQRNIHSVDEITDGERLTLTLWFTRDGSHDEDVKLVYLLSQHLLHKDMAASYLPLPASFDMYCFSQDQASNDQFGFNICWARLHILGYGISISEDGACDSDVSELLVKPVQLVRGDELLDHEFVNILQALQVVHFYCWQGSALKTKALNVHTNVLKLSDKDKERINYLKSVLLNDEDLVLKVFGSMPLEENGGICFDWTGIVAAIAAWEDYVTKLSKQIHLELPYWRMHESIYTVQLDE 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04860 444 PANTHER LEPRECAN 1 24 440 IPR039575 GO:0032963
Aip03g04860 444 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN 24 440 - -
Aip03g04860 444 SMART p4hc 28 229 IPR006620 GO:0005506|GO:0016705|GO:0031418
Aip03g04860 444 Gene3D q2cbj1_9rhob like domain 21 245 - -
Aip03g04860 444 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 126 230 IPR005123 -
Aip03g04860 444 Pfam 2OG-Fe(II) oxygenase superfamily 144 228 IPR044862 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04860 Aip-Chr3 132842351 132844978 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g04860 03 132842351 132844978 Aip03g04860 03 132842351 132844978 ECH