Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04839 ATGAGGCTATGGCAAAAGGCAACGGGGGCTATCAAAGATAGGAAAAGTATATGGACCGCTAAATTGATGCATAACGGTCCATATCAAAATCCTATCTTCGAAGCGGTGGTCATCAAGGCTACAAGCCATGATGAGCACTGCATCGATTGCAAGAACGTGCAGAGAGTCTTTCAATGGCTCCGAACGTCCCCGTTGCACCTCAAGCCCCTGCTCTTCGCCTTGTCCTTTCGAATGGAGAAGACGAAGAACTGGGTGGTTGCCATCAAGGGCCTCATGCTCATGCATGGCGTCTTCTGCACCAACATTGCTGCGGTGCAGAAGATGGGAAGGTTACCCTTCGATTTCTCAAACTTCTCCGATGGATACCTGCACCCTTCAAAAGCTTGGGGATTCAACTCCTTCGTGCGTGCCTATTTCAATTACTTGGACCAAAGGTCAGCGTTCGTTTCCTCCGAATTCAAGAGGGTGAGCATGAAGAACAACAAGAAGGATGGTCTTGAGGTTGAGGAGACGTTGATGGAGGAGCTTAAAATGTTGCAGAATTTTCAGGCGCTGATTGACTCGCTCCTTCACATAAAGCCCCGGAACGAGAGCATGAAGCAGAATGCACTGATCCTTGAAGCCATGGATTGCGTGATAGTTGAGATATTCGACGTTTACAGCAAGTTCTGTAAGAGAATGGCGAATGTGTTGATGAGAATCTACGATGTTGGTGGCAGAGAAGAGGCTGCCGTGGCTCTCAAGGTTCTTCAGAAAGCGTCGTCCCAAGGCGAGGATCTGTCTTGCTACTTCAAGTTCTGTAAGGTGATTGGTGTCCTCAACGCCTCTCAGTGCCCCAAGATTGAAAGAATCTCCGATGAAGACATTGAGGATCTTGAAAGAATCATAAGCAGCGGAGACAACATGGCCATTGTGCTGAGCGACAGTTGCATGGAGAAAGAGTTGAAGACGGTAATCACAGAGCAGTGGGAGGTGTTTGATGATGTTGATGATTATTCTTCATGGCAAAACAAGAACCCTTTCTTGGATTCATCATATGACTACAGCCTCCTATGTCCTCCTCCTCCTCCACCTCAAGTTCTTCCTGATCTAATTAGTTTCTAG 1104 0.4746 MRLWQKATGAIKDRKSIWTAKLMHNGPYQNPIFEAVVIKATSHDEHCIDCKNVQRVFQWLRTSPLHLKPLLFALSFRMEKTKNWVVAIKGLMLMHGVFCTNIAAVQKMGRLPFDFSNFSDGYLHPSKAWGFNSFVRAYFNYLDQRSAFVSSEFKRVSMKNNKKDGLEVEETLMEELKMLQNFQALIDSLLHIKPRNESMKQNALILEAMDCVIVEIFDVYSKFCKRMANVLMRIYDVGGREEAAVALKVLQKASSQGEDLSCYFKFCKVIGVLNASQCPKIERISDEDIEDLERIISSGDNMAIVLSDSCMEKELKTVITEQWEVFDDVDDYSSWQNKNPFLDSSYDYSLLCPPPPPPQVLPDLISF 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04839 367 ProSiteProfiles ENTH domain profile. 25 156 IPR013809 -
Aip03g04839 367 CDD ANTH_N_AP180_plant 33 148 - -
Aip03g04839 367 SUPERFAMILY GAT-like domain 174 297 - -
Aip03g04839 367 Gene3D - 4 153 IPR008942 -
Aip03g04839 367 PANTHER OS08G0467300 PROTEIN 1 334 - -
Aip03g04839 367 Pfam ANTH domain 34 296 IPR011417 GO:0005543
Aip03g04839 367 SUPERFAMILY ENTH/VHS domain 33 149 IPR008942 -
Aip03g04839 367 PANTHER CLATHRIN ASSEMBLY PROTEIN 1 334 IPR045192 GO:0048268|GO:0072583
Aip03g04839 367 Gene3D ANTH domain 157 312 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04839 Aip-Chr3 132675290 132676393 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g04839 03 132675290 132676393 Aip03g04839 03 132675290 132676393 ECH