Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04390 ATGTCTCTGCCACCCATAGAGTGTATTTACGTAACGGAGGACTGTGTTCGCGAATGGAAGAGTGGCAATCCTGCCCTCAGGGTTTCCGAACCAGTTCCATCGCTACGCTTCCTCTACGAGCTTTGCTGGACTATGGTTCGGGGTGAATTGCCGTTTCAGAAGTGTAAAGTAGCGTTAGATTCTGTCATATTCTCCGACAGACCGCCGACTGAGAAATTAGCTTCAAATTTTGCAGATATAGTGACCCAAATGGCCCAAGATCATACAATGTCGGGAGAGTTTCGATCTCGTCTCATTAAACTGGCAAGATGGCTTGTGGAATCTGAATTGGTTCCAGTTAGGCTACTTCAAGAACGTTGTGAGGAAGAGTTTTTGGGGGAGGCTGAAATGATCAAAATAAAGGCTCAGGATTTGAAGGGAAAAGAGGTCAGAGTTAATACACGGCTTCTTTATCAACAAACCAAATTTAACCTTCTTAGAGAAGAGAGTGAGGGCTATGCAAAGCTGGTCACTCTTCTTTGCCGAGATTCCGAAGCTCCAACTCAAAAGGCATCTGCCGCAACAATTGGCATTATTAAGTCGTTAATTGGCCATTTTGATTTGGATCCAAATCGTGTTTTTGATATTGTTCTTGAGTGTTTTGAACTTCAACCTGATAACAGTGTGTTTCTAGAGCTGATTCCTATTTTCCCCAAGTCTCATGCTTCACAGATTCTTGGATTTAAGTTTCAATATTATCAGCGCATGGATGTCAGCTGCCCTGTTCCCTTTGGGCTCTATAAGCTCACAGCGTTGCTGGTGAAACAAGATTTTATTGATATTGATAGCATATATGCACATCTACTTCCGAAGGATGAAGAAGCATTTGAGCATTATAACACTTTCTCTTCCAAGCGGCTTGATGAGGCTAACAAAATTGGAAGAATAAACCTTGCTGCTACTGGAAAAGATCTAATGGATGATGAGAAACCGGGTGACGTCGCAATAGATCTTTTTGCTGCTATAGACATGGAAACTGATGCAATTGAAGAGCGAAAGTCTGAGCTTCAAAACAGTCAAACTTTGGGGTTGCTTACCGGCTTTCTTTCGGTGGATGACTGGTATGTGTATCATGCACATATGCTGTTTGGTCGTCTGTCACCACTCAATGCAGTGGAACATATCCAAATATGTGAGAGTTTGTTTAGGCTCATTGAGAGGACAATTTCTTCAGCATATGATGTTATTCGGCACGCACATCATCAAAACTCTGGATCATCCACAGGAGTTAGTACTGATCCTATGGATGTAGATAACTCCTCAAGACGAAGTTCTTTCATAGATCTTCCGAAGGAGCTTTTTCAGATGCTTGCTTGTACTGGACCCTACCTTTACCGTGACTCTATATTGTTGCAGAAGGTTTGTAGGGTGCTGAGAGGTTATTACTTTTCTGCCCTTGAGCTTGTTAGTCATGGCGACAGTGCCTTGAATTCTCAATTTCCTGGAATTGGAAATCCTCATCTACACCTGAAAGATGCAAGGCTAAGGGTGGAGGATGCTTTAGGAGCTTGCCTACTACCTTCTTTGCAACTGATTCCTGCCAATCCAGCTGTTGGCCAGGAAATTTGGGAACTAATGAGTCTCCTTCCTTATGAGGTGCGATATCGTTTATACGGTGAATGGGAGAAAGATGATGAGCGCATACCTATGCTCCTAGCAGCAAGACAAACAGCCAAGTTGGACACTAGACGCATTTTAAAACGGTTGGCAAAGGAGAATTTGAAGCAGCTAGGTCGAATGGTCGCAAAACTAGCTCATGCTAACCCTATGACTGTCCTACGAACAATTGTTCATCAGATTGAGGCATACAGAGACATGATTACTCCTGTAGTGGATGCATTTAAGTATTTGACTCAGCTAGAGTATGACATTTTGGAATATGTTGTGATTGAGCGCTTGGCACTTGGTGGACGTGATAAGCTAAAAGATGATGGTCTAAATTTGTCAGATTGGCTTCAATCACTAGCTTCATTTTGGGGTCACCTGTGTAAGAAGTACCCTTCAATGGAATTGCGAGGCCTTTTCCAGTATCTAGTGAACCAGTTAAAAAAGGGGCAAGGAATTGAGCTTGTTCTATTGCAGGAACTTATTCAACAAATGGCAAACGTCCAGTACACAGAGAACTTGACTGAGGAGCAGCTGGATGCCATGGCAGGGAGTGACACTCTTCGATATCAAGCAACTTCTTTTGGAGTAACTCGAAATAATAAGGCATTGTTAAAGTCTACTAGCAGACTTAGAGATGCATTACTTCCCAAAGATGAACCGAAGTTGGCGATCCCCCTCCTATTGCTTATTGCTCAACATCGTTCTCTGATTGTCATCAATGCAGATGCACCATACATTAAGATGGTTAGTGAGCAATTTGATAGATCCCATGGAACTCTTCTTCAATATGTGGAATTTCTTTGCAGTGCAGTTACTCCAGCATCAAATTATGCTGCACTCATTCCATCGCTTAATGACCTGGTCCACCTTTACCACCTGGACCCTGAGGTTGCTTTCTTGATATATCGCCCTGTGATGAGACTTTTCAAGTCTCAGAGGAGTCCTGATGTTTGCTGGCCGTTGGATGATAATAATGCTGCAAATGATGCATCTACAGAATCTGATCTTGTAGATCATTCTGGCAGTATGGTTCTAGATCTTGGCTCTGCTCGAAATCCTATAAGGTTATAA 2718 0.4272 MSLPPIECIYVTEDCVREWKSGNPALRVSEPVPSLRFLYELCWTMVRGELPFQKCKVALDSVIFSDRPPTEKLASNFADIVTQMAQDHTMSGEFRSRLIKLARWLVESELVPVRLLQERCEEEFLGEAEMIKIKAQDLKGKEVRVNTRLLYQQTKFNLLREESEGYAKLVTLLCRDSEAPTQKASAATIGIIKSLIGHFDLDPNRVFDIVLECFELQPDNSVFLELIPIFPKSHASQILGFKFQYYQRMDVSCPVPFGLYKLTALLVKQDFIDIDSIYAHLLPKDEEAFEHYNTFSSKRLDEANKIGRINLAATGKDLMDDEKPGDVAIDLFAAIDMETDAIEERKSELQNSQTLGLLTGFLSVDDWYVYHAHMLFGRLSPLNAVEHIQICESLFRLIERTISSAYDVIRHAHHQNSGSSTGVSTDPMDVDNSSRRSSFIDLPKELFQMLACTGPYLYRDSILLQKVCRVLRGYYFSALELVSHGDSALNSQFPGIGNPHLHLKDARLRVEDALGACLLPSLQLIPANPAVGQEIWELMSLLPYEVRYRLYGEWEKDDERIPMLLAARQTAKLDTRRILKRLAKENLKQLGRMVAKLAHANPMTVLRTIVHQIEAYRDMITPVVDAFKYLTQLEYDILEYVVIERLALGGRDKLKDDGLNLSDWLQSLASFWGHLCKKYPSMELRGLFQYLVNQLKKGQGIELVLLQELIQQMANVQYTENLTEEQLDAMAGSDTLRYQATSFGVTRNNKALLKSTSRLRDALLPKDEPKLAIPLLLLIAQHRSLIVINADAPYIKMVSEQFDRSHGTLLQYVEFLCSAVTPASNYAALIPSLNDLVHLYHLDPEVAFLIYRPVMRLFKSQRSPDVCWPLDDNNAANDASTESDLVDHSGSMVLDLGSARNPIRL 905
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04390 905 PANTHER THO2 PROTEIN 11 903 IPR040007 GO:0000347|GO:0006397|GO:0006406
Aip03g04390 905 Pfam THO complex subunit 2 N-terminus 37 418 IPR032302 -
Aip03g04390 905 Pfam THO complex subunit 2 N-terminus 438 592 IPR032302 -
Aip03g04390 905 Pfam Transcription- and export-related complex subunit 594 669 IPR021726 -
Aip03g04390 905 PANTHER THO COMPLEX SUBUNIT 2 11 903 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04390 Aip-Chr3 128231189 128242454 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g04390 03 128231189 128242454 Aip03g04390 03 128231189 128242454 ECH