Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04385 ATGATTCCGAGAATTTCGGTTAAATTGGCGGGAAATGGGTGGGAGGCAGCTAGCGCCTTTTGGGGTTTTGCATTATTTTCTCACACGTGTGGGTCCCATCCTGCATTCAATCTCAACCAACCACCACCCTCCGATCACTCTCCGATCCAACGGTTCTCACCGCATTCCCATTCCCGCCTATCGTACGACACCTCTACTCTGCACTCTGCAGCAAAAGAAACGATTTGGTTGAGGTCTCTGTTTTTTTCTCTTCACTTCCCTTCAAGCCGCCTCTGCTACTCTCCAACCAAATCTCATTCAAAAAACATGGTGGGGAATAATCATTCACAAAGGGAAAGGGAAAGGAATAGAGATTGGATTAAAGTTCTTATGAATAGCAATGGCCACTGTGATGATCATCCCGATCTTCGTTCTAAGGAAAAGAATTTTTTCTGTGTAGACTGTGCAGTTAGAATGTGTAAGAACTGTAAGGAAGCTCATTCCCTTCACAGAAGGTTTCAGATATACAAATATTCCTATCAAGATGTCTTCCGCCATTCCGAGCTGCAGAAATACTTTGACTGCTCAAAAATTCAGACTTACATATCCAACAATGAAAGGATTGTGCATCTAAAACCCCGGCCTTCAACTAATAAACCTAAAACTTCTGATCTAAGCCCTGATTCTAAATTCAAAGAATACAACTTTTCATCAAGAACAAAGCCGGGTGGTACATGTGAAGAATGTGGGAAACACTTACAAGATGAGCGGAATCGCTTCTGCTCTATTACGTGCAAGGTCTCAGTGCTTCCCTTGGAAGCTCAAAACCAAGATCACAATCAATGTTCACGGAGGAGTTCAGAGGAATCTGCTAGTCAAAGTAGTAGGTTCATCAACACTCCAAAACCAGAAGGTAGTGATTTTACTTTAGATAACCAGAATTCAGAACCAGAGTCATCTTTATCTGAAGCTGAGCCATATGGATGGGTTGAAGTTGTTAACTACAGAAAGCGCCCAAGGAAAACAACCCCTCAAAGGCCTATTTTTGTTTTCATGTCCTAA 1041 0.4236 MIPRISVKLAGNGWEAASAFWGFALFSHTCGSHPAFNLNQPPPSDHSPIQRFSPHSHSRLSYDTSTLHSAAKETIWLRSLFFSLHFPSSRLCYSPTKSHSKNMVGNNHSQRERERNRDWIKVLMNSNGHCDDHPDLRSKEKNFFCVDCAVRMCKNCKEAHSLHRRFQIYKYSYQDVFRHSELQKYFDCSKIQTYISNNERIVHLKPRPSTNKPKTSDLSPDSKFKEYNFSSRTKPGGTCEECGKHLQDERNRFCSITCKVSVLPLEAQNQDHNQCSRRSSEESASQSSRFINTPKPEGSDFTLDNQNSEPESSLSEAEPYGWVEVVNYRKRPRKTTPQRPIFVFMS 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04385 346 MobiDBLite consensus disorder prediction 269 317 - -
Aip03g04385 346 MobiDBLite consensus disorder prediction 209 224 - -
Aip03g04385 346 ProSiteProfiles Zinc finger B-box type profile. 125 168 IPR000315 GO:0008270
Aip03g04385 346 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 104 340 - -
Aip03g04385 346 MobiDBLite consensus disorder prediction 37 57 - -
Aip03g04385 346 MobiDBLite consensus disorder prediction 204 224 - -
Aip03g04385 346 Pfam B-box zinc finger 126 165 IPR000315 GO:0008270
Aip03g04385 346 MobiDBLite consensus disorder prediction 269 314 - -
Aip03g04385 346 SMART bboxneu5 125 168 IPR000315 GO:0008270
Aip03g04385 346 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 104 340 - -
Aip03g04385 346 Pfam PLATZ transcription factor 170 260 IPR006734 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Aip03g04385 PLATZ 1.6e-27 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g04385 03 128207107 128210129 Aip03g04385 03 128207107 128210129 ECH