Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04377 ATGGTGTCAAGATCTTATTCAAATCTACTGGAGCTGGCATCGGGTGAGTCTCCATCATTTGGGACCATGAACAGGAGAATCCCTCGGATTATGACTGTGGCTGGTTTGATATCATCCGATGTTGATGATGACCGTGCTGAGAGTGTGTGCTCTGACCCTTCTTCTTCCTCTGTCCACCGTGACAGGATCATCATTGTGGCTAATCAGCTTCCTATAAGGGTTCAGAGAAAGCCAGACGGTAACAGCAACTGGCTCTTCACTTGGGATGACAATTCACTTCTCCTTCAACTCAAAGATGGCTTAGGTGATGATGACACTGAGGTTATCTATGTTGGTTGCCTCAAAGAAGAAGTGCATCCAAATGAACAAGATGAGGTTTCTCAGATACTTCTCGAGACTTTCAAGTGTGTCCCTACTTTTCTCCCTCCTGATCTCTTTACCAGGTACTACCATGGCTTCTGCAAGCAACAGTTATGGCCACTGTTCCATTACATGCTGCCTTTGTCACCAGACCTTGGAGGCAGGTTCAATAGGTCACTGTGGCAGGCTTATGTATCTGTCAATAAAATCTTTGCAGATAGGATTATGGAAGTTATTAACCCTGAGGATGATTATGTCTGGATACATGATTATCATCTCATGGTGTTGCCAACTTTCTTGAGGAAGAGATTCAACAGAGTCAAACTTGGGTTTTTCCTACATAGTCCATTTCCTTCATCGGAAATATACAAGACATTGCCTATTAGGGAAGAACTCCTGAGAGCACTTTTGAATTCAGATTTGATTGGATTCCACACCTTTGACTATGCCAGGCATTTTCTCTCATGTTGTGGTAGGATGCTTGGTCTAACCTATGAGTCCAAAAGGGGTTATATTGGGATTGAGTATTATGGTAGAACTGTTAGTATCAAGATTCTTCCGGTTGGGATTCACTTGGGACAGCTTCAATCAGTTTTAAGCATGTCCAAGACTGAAGAGAAAGTTTCTGAGCTCATCACACAGTTTACTGATGAAGGCAAGATAATGTTACTTGGTGTTGATGACATGGACATCTTTAAGGGAATAAGTTTGAAGCTATTGGCAATGGAGCAGCTCCTGATTCAGCACCCTGAGTGGCAAGGAAAGGTTGTGTTGGTTCAGATAGCCAACCCTGCAAGGGGAAGAGGGAAGGATGTGAAGGAAGTGCAGGCCGAGACAAAGGCCACTGCGAAACGAATAAACGAAACCTTTGGGAAGCCAGGGTATGATCCTGTTATTCTTATTGAAGAGCCACTGAGGTTTTATGAGAGAGTTGCATACTATGTTGTTGCTGAGTGTTGTTTGGTAACTGCAGTGAGGGATGGAATGAATCTCATACCGTATGAATACATAATCAGTCGTCAAGGGAATGATAGGTTGGACAAAGTTTTGGGAGTAGCTTCCTCTCCAAAGAAAAGCATGCTGGTTGTGTCTGAGTTCATTGGTTGTTCGCCATCTTTGAGTGGCGCAATCAGAGTGAACCCTTGGAACATTGATGCTGTGGCAGATGCAATGGACTGTGCCCTTGAAATGGCTGATTCAGAGAAGCAGCTTCGGCATGAGAAGCATTATAGATATGTTAGTACTCATGATGTAGGTTACTGGGCGCGCAGCTTCTTGCAAGATTTGGAAAGGACTTGTGGTGATCACGTACGGCGAAGGTGGTGGGGGATTGGCTTTGGATTGAGTTTTAGAGTTGTGGCACTTGATCCAAACTTCAGGAAGCTCTCAATGGAGCACATAGTTTCGGCTTACAAGAGGACGACAACTCGGGCGATACTTCTTGATTATGATGGTACATTGATACCTCAGGCATCCATTGATAAGAGCCCAACAAGTAACTCCATTAAGATGCTTAACAGTTTGTGTAGGGATAAGGACAACATGGTGTTTCTCGTCAGTGCTAGAAGCCGAAAGAGGCTCGCAGAATGGTTTTCTCCTTGTGAGAGTCTTGTAATTGCTGCTGAGCATGGTTACTTTCTAAGATTGAAAAGAGATGCAGAATGGGAAACCTGTGGGCCTGCTATAGACTGTAGTTGGAAACAAATTGCAGAACCTGTAATGAAGCTTTATACAGAAACAACTGATGGATCCACCATTGAAGATAAGGAAACTGCACTTGTTTGGTGCTATGAGGATGCAGATCCTGATTTCGGATCATGCCAGGCTAAGGAACTTCTTGATCATCTGGAAAGTGTGCTTGCAAATGAACCGGTAACAGTCAAGAGCGGACAGAACAATGTTGAGGTTATACCACAGGGCGTAAGCAAGGGGCTTGTGGCGAAGCGGCTGCTTTCCATGATGCATGAGAAGGGAATGTCACCTGATTTTGTTTTGTGTATAGGAGATGATCGGTCGGACGAAGACATGTTCGAAGTAATCGCCACTTCCATGGCTGGTTCTTCGGCAACACCCAGGGCTGAAGTATTTGCATGTACTGTTGGTAAAAAACCAAGCAAGGCTAAGTACTACCTTGATGATACCGCTGAAATAGTGAGATTGGTGCATGGCTTGGCTTCTGTTTCGGAGCAAAAAGTGTTACTCTAG 2565 0.4429 MVSRSYSNLLELASGESPSFGTMNRRIPRIMTVAGLISSDVDDDRAESVCSDPSSSSVHRDRIIIVANQLPIRVQRKPDGNSNWLFTWDDNSLLLQLKDGLGDDDTEVIYVGCLKEEVHPNEQDEVSQILLETFKCVPTFLPPDLFTRYYHGFCKQQLWPLFHYMLPLSPDLGGRFNRSLWQAYVSVNKIFADRIMEVINPEDDYVWIHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIREELLRALLNSDLIGFHTFDYARHFLSCCGRMLGLTYESKRGYIGIEYYGRTVSIKILPVGIHLGQLQSVLSMSKTEEKVSELITQFTDEGKIMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETKATAKRINETFGKPGYDPVILIEEPLRFYERVAYYVVAECCLVTAVRDGMNLIPYEYIISRQGNDRLDKVLGVASSPKKSMLVVSEFIGCSPSLSGAIRVNPWNIDAVADAMDCALEMADSEKQLRHEKHYRYVSTHDVGYWARSFLQDLERTCGDHVRRRWWGIGFGLSFRVVALDPNFRKLSMEHIVSAYKRTTTRAILLDYDGTLIPQASIDKSPTSNSIKMLNSLCRDKDNMVFLVSARSRKRLAEWFSPCESLVIAAEHGYFLRLKRDAEWETCGPAIDCSWKQIAEPVMKLYTETTDGSTIEDKETALVWCYEDADPDFGSCQAKELLDHLESVLANEPVTVKSGQNNVEVIPQGVSKGLVAKRLLSMMHEKGMSPDFVLCIGDDRSDEDMFEVIATSMAGSSATPRAEVFACTVGKKPSKAKYYLDDTAEIVRLVHGLASVSEQKVLL 854
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04377 854 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 61 552 - -
Aip03g04377 854 Pfam Glycosyltransferase family 20 62 550 IPR001830 GO:0003824|GO:0005992
Aip03g04377 854 Gene3D Glycogen Phosphorylase B; 54 317 - -
Aip03g04377 854 Gene3D Glycogen Phosphorylase B; 318 534 - -
Aip03g04377 854 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 599 802 IPR006379 -
Aip03g04377 854 CDD GT20_TPS 62 550 IPR001830 GO:0003824|GO:0005992
Aip03g04377 854 Gene3D - 596 724 IPR023214 -
Aip03g04377 854 Gene3D - 725 853 IPR023214 -
Aip03g04377 854 SUPERFAMILY HAD-like 597 842 IPR036412 -
Aip03g04377 854 PANTHER ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE [UDP-FORMING] 6 1 851 - -
Aip03g04377 854 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 1 851 IPR001830 GO:0003824|GO:0005992
Aip03g04377 854 CDD HAD_TPP 598 839 - -
Aip03g04377 854 Pfam Trehalose-phosphatase 600 834 IPR003337 GO:0003824|GO:0005992
Aip03g04377 854 TIGRFAM T6PP: trehalose-phosphatase 596 844 IPR003337 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04377 Aip-Chr3 128149175 128153450 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g04377 1 850 Trehalose Biosynthesis Gene Families AT1G68020 80.556 0.0 1459
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g04377 03 128149175 128153450 Aip03g04377 03 128149175 128153450 ECH