Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04374 ATGAATGAGTTGATTAGTTTCATTGAAAAAGGGAATAGAAGCAAGGGAGAGATGGGAAAAGAGGAGATAGTGGAGGAAGCATTCAGGAGCTTAGGAAAAGGGTTTGACTTGACCTCAGATTTCAGACTCAAGTTCTGCAAAGGCGAAGAGCGTATGGTTGTTCTGAACGAAACGGAGAGAAGAGATGTCAGGGTGCCTGGTTTCGGAACCATTAAGGATGTCTCTGTTGACATCAAATGCGACAAAGGTGACCGCACTCGCTACCAGTCCGACATCCTTACCTTCACCCAGATGTCGGAGCTGTTCAACCAGAAGAGCTCAATACATGGGAAAATTCCATCAGGGTATTTCAACAGAGTGTTTGGATTTGATGAAGCTTCGTGGGCAAGTGATGCAGCCAACACAAAGAATTTGGGTCTTGATGGATATTTCATAATTCTCTTCAATGTTCATATTGATCGATACCCGCTTCAACTATCTAAACAAGTCATTCAACATCTTCCTTCTTCCTGGGATCCTCCTGCACTTGCAAGATTCATTGAGAAATATGGGACACACATCCTGGTGGGGCTGAGCATTGGTGGCAAAGATTTGGTGCTTGTGAAGCAAGACGTGTCTTCCAATTTGGGGCCATCAGATCTGAGGAAGAACTTGGATGACCTTGGAGATCAGTTATTCACTGGCACTTGCAATTTCCTTCCTAAAACCAAAGATCACAAGAACAAGGCACCACAGGCTTTTGATGTGTTTGGTCCCAAAGTTGTTGCCTTCAATAGCTCCACATGGGTTTGTGCAAAGGATGGAATAACAGTGATATGTTCAAAGAGAGGAGGAGACACACAAGTGAGCAACCATTGTGAGTGGCTTCTCACAGTTCCAGAGAAGCCAGATGCAGTTCATTTCAACTTCATTCCCATCACTTCTCTTCTCAAAGGTGCTCCTGGCAGAGGCTTCCTCTCACATGCTATCAACCTCTACCTCAGATATAAACCTCCTATGTCAGATTTGCCATACTTTCTTGACTTCCAAGCACACAAACTTTGGGCTCCCATTCACAATGATCTGCCTTTGGGTCCACTCACAAACAGAACCAATCCTTCACCTTCTCTCACCTTCAACTTGATGGGTCCCAAGCTTTATGTCAACACAGCTAAGGTTACAGTTGGTAAGAGACCAATCACAGGGATGCGTTTGTTTCTTGAGGGCATCAAGTGCAACAGATTAGCCATACACCTGCAACACCTGTTAAACACTCCAATAATGTTTGATGGGAAAATAGAGGACACAACAATATGGTCAGAAGAAGTCAACGATGACCGTTTCTTTGAAGCAGTCAACAGCAAGAAATTCTCCCATGTGTGCACAGCACCAGTGAAATACAACACCAGATGGAGGACTGAAAATGAGGACGTGGCATTCATTGTCACTGGGGCACAACTTCATGTGAAGAAACATGATTCAGTAAGGAATGTACTTCATCTTAGGCTACTGTTCTCTAAGGTGTCTAATTCAGTTGTTGTGAAATCAAATTGGACACAAGGGTCTTCAGGGTTGTCCCAGAAATCTGGGATATTCTCAGCAATAAGCACATCAATTATTTCTGGAAGTAACAAAGATCATAAAAAACCAGCATCAGTGGTTGTGGATTCAAGTGTGTTTCCAACAGGGCCTCCAGTGCCAGTGCAAACAAACAAGCTACTGAAATTTGTTGATTTGTCACAGTTGTGTAAAGGGCCACAAGATAGCCCTGGCCATTGGTTGGTCACTGGAGCAAGATTGGTCTTGGATAAGGGTAAAATACGTTTATGGGTTAAGTTTTCCTTGTTAAACACTGGTGAATGA 1842 0.4354 MNELISFIEKGNRSKGEMGKEEIVEEAFRSLGKGFDLTSDFRLKFCKGEERMVVLNETERRDVRVPGFGTIKDVSVDIKCDKGDRTRYQSDILTFTQMSELFNQKSSIHGKIPSGYFNRVFGFDEASWASDAANTKNLGLDGYFIILFNVHIDRYPLQLSKQVIQHLPSSWDPPALARFIEKYGTHILVGLSIGGKDLVLVKQDVSSNLGPSDLRKNLDDLGDQLFTGTCNFLPKTKDHKNKAPQAFDVFGPKVVAFNSSTWVCAKDGITVICSKRGGDTQVSNHCEWLLTVPEKPDAVHFNFIPITSLLKGAPGRGFLSHAINLYLRYKPPMSDLPYFLDFQAHKLWAPIHNDLPLGPLTNRTNPSPSLTFNLMGPKLYVNTAKVTVGKRPITGMRLFLEGIKCNRLAIHLQHLLNTPIMFDGKIEDTTIWSEEVNDDRFFEAVNSKKFSHVCTAPVKYNTRWRTENEDVAFIVTGAQLHVKKHDSVRNVLHLRLLFSKVSNSVVVKSNWTQGSSGLSQKSGIFSAISTSIISGSNKDHKKPASVVVDSSVFPTGPPVPVQTNKLLKFVDLSQLCKGPQDSPGHWLVTGARLVLDKGKIRLWVKFSLLNTGE 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04374 613 Pfam MAC/Perforin domain 117 326 IPR020864 -
Aip03g04374 613 SMART MACPF_8 143 328 IPR020864 -
Aip03g04374 613 PANTHER OS02G0736300 PROTEIN 21 611 - -
Aip03g04374 613 ProSiteProfiles Membrane attack complex/perforin (MACPF) domain profile. 14 340 IPR020864 -
Aip03g04374 613 PANTHER MACPF DOMAIN-CONTAINING PROTEIN CAD1 21 611 IPR044663 GO:0006952|GO:0012501|GO:2000031
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04374 Aip-Chr3 128139934 128145959 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g04374 03 128139934 128145959 Aip03g04374 03 128139934 128145959 ECH