Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04363 ATGTCGTGGGAAGACGAGATTGTGATGCGTGATGTGACGAACGCGGGTCTCGTTGTCAGTGATCGCATTGGTCGCGAGGTTTCGTCTCAGCTTGACCTCGAAGAAGCTCTTGAAGCTTCAAGATATGCTAGCCACCCTTACTCCACTCTCCCCAGAGAGTGGCCCCCTTTAGTTGAGGTTGCCAATACATGGGAGTTGCCTCCTGTTCTCATTGAAAGATACAATGCAGCTGGTGGGGAAGGAACTGCCTTTTGTGGAATATTTCCTGAAATACGTAGGGCATGGGCATCTGTGGACAATTCCTTGTTTCTTTGGCGTTTTGATAAGTGGGATGGTCAATGTCCTGAATATAGTGGGGAAGAGCAAGCTATTTGTGCAGTTGGTCTTGCAAAATCAAAACCAGGTGTTTTTGTTGAAGCCATCCAATATCTTTTAGTTTTAGCAACGCCTGTTGAGTTGATTTTGGTAGGAGTGTGCTGCTCTGGAGGAGCCGATGGATCAGACCCATTTGCAGAAGTAACATTACAGCCATTGCCAGAGTATACTGTACCGTCTGATGGGGTTACAATGACTTGTGTGACATGTACTGATAAGGGCCGTATTTTCCTTGCTGGTCGTGATAGCCATATATACGAGCTTATTTATTCTACAGGTTCAGGATGGCAAAAGCGCTGCAGAAAAATCTGCCTCACTGCTGGCTTAGGAAGTTTAATTTCAAGCTGGGTTATACCAAATGTGTTCAACTTTGGAGCCATCGACCCCATTGTTGAAATGGTTTTTGATAATGAGAGGCAAATATTGTATGCACGAACTGAAGAGATGAAGCTTCAGGTTTATGTTCTAGGGCAAAATGGGGATGGTCCATTAAAGAAAGTTGCTGAAGAAAGGAATCTTGTTAATCAGAGGGATGGTCATTATGGAGGTAGACAATCAACAGGATCAAGAGTCTCAAATCGTTCACCCAAGCCATCTATTGTTTGTATTGCACCGTTATCCACACTTGAATCCAAGTTGCTGCATCTTGTTGCTGTTTTATCAGATGGCAGAAGGATGTACCTGTCTACTTCTCCTTCTAGTGCAAATTTGACTGGGTTCAGCACCAGTCATCACAGGCCTAGCTGTTTAAAGGTTGTTGCTACAAGGCCTGCTCCTCCTTGGGGTGTTAGTGGTAATCTCACATTTGGAGCCATAGCTCTTGCGTCTAGGCCTCAAAATGAGGATCTCTCATTGAAAGTTGAGGCAGCATATTGTTCTGCAGGAACTCTTATCCTTTCTGATGCATCACCTTCAGCTATGCCTTCTCTCCTTGTATTGAACCGGGATTCAAGCACCCAGTTATCACCATCAGGTAATCTTGGGACAAATTCAAGGAGTTCCCGTGCATTACGAGAATCTGTATCTTCTTTACCAGTTGAAGGGCGAATGCTTTCTGTGGCAGATGTCTTACCTTTGCCTGATACTGCATCTACTGTGCAGTCTTTATATTCAGAAATTGAGTTCAGTGGTTATGAGAGCCCAATGGAATCATGTGACAGGGTATCTGGGAAACTCTGGGCAAGGGGAGACCTTTCGACTCAACATATATTGCCAAGAAGGAGGATTGTTATCTTCAGCACAATGGGCATGATGGAAATTGTGTTAAACAGGCCACTGGACATTTTAAGAAGGTTATTAGAGTCCAGCTCTCCAAGATCAGTTTTAGAAGATTTCTTCAATCGTTTTGGTGCTGGTGAGGCAGCTGCTATGTGTCTAATGCTAGCTGCAAGAATAGTGCACTCGGAAAACCTTATTAGCAATGTTATTGCCGAGAAGGCTGCTGAAGCTTTTGAGGATCCAAGAGTTGTTGGAATGCCACAACTTGAAGGTAGTAGTGCATTATCAAACACAAGAACTGCTGCTGGTGGATTTAGCATGGGCCAGGTTGTTCAGGAGGCTGAGCCAGTATTTTCAGCCGCACATGAAGGACTCTGTTTGTGTTCATCTAGATTACTTTTTCCTCTTTGGGAACTTCCTGTGATGCTTGTGAAAGGTAATTTAGCCCCTTCAGGTGCTTTATCTGAAAATGGGGTAGTTGTCTGCAGACTCTCTGTTGGTGCTATGCAAGTCCTTGAACACAAAATCCGATCTTTAGAAAAATTCTTAAGATCTAGAAGGAACCAGAGGAGAGGACTTTATGGATGTGTTGCAGGTTTGGGCGATCTAAGTGGTTCAATTCTATATGGTACTGGTTCAGCATTAGGTGCAGGTGATCGAAGTATGGTGAGAAACTTATTTGGTGCGTACTCCAGAAATGTGGAGTCTAATGGTGGTGGAACAAGTAACAAAAGACAAAGGCTGCCATATAGTCCTGCAGAATTAGCTGCCATGGAGGTGAGGGCAATGGAATGTATTAGGCAGTTGCTTCTTAGATCTGGTGAAGCGCTGTTTTTGCTTCAACTTATTTCCCAGCATCATGTCACTCGATTGATTCAAGGATTTGATGCTAACCTTCAACAAGCATTAGTTCAGTTAACATTTCATCAGTTAGTTTGTTCTGAGGAGGGTGACCGGCTTGCTACGAGACTTATTTCTGCTCTAATGGAGTATTATACTGGTCCTGATGGTAGGGGAACTGTAGATGACATTAGCAGGAGATTAAGAGAGGGTTGTCCAAGCTACTATAAGGAGTCTGATTACAAGTTTTTCTTAGCTGTGGAAGCTCTGGAGAGAGCTGCTGTGACTATAGATGATGAGGAAAAGGAGAATCTTGCAAGAGAAGCATTTAATTGCTTAAGCAAAGTTCCAGAGTCTGCAGACTTACGAACTGTTTGCAAGCGTTTTGAGGATTTGAGATATTATGAAGCTGTAGTGCGCTTACCTCTTCAAAAGGCACAAGCTATCGATCCTGCAGGTGATGCTTATAATGATGAAATTGATGCAAGTGTCAGAGAACAGACACTTGCTCAGCGCGAACAGTGTTATGAGATAGTTATTAGTGCTTTACGGTCTCTGAAAGGTGACAACTCTCATAAGGAATTTGGCTCTCCTATCAGATCTGCTGCTTTGCAATCTACCCTTGATCCAGCTTCTCGAAAAAAATATATTAGTCAAATTGTTCAACTTGGTGTCCAGTCTCCTGACAGAATTTTCCATGAGTATCTATACCAAGCTATGATTGATTTAGGTCTTGAAAATGAGTTGTTAGAGTATGGAGGTCCTGATCTGTTGCCCTTTTTGCAAAGTGCGGGTCGTAAACCCATCCAAGAGGTTCGTGCTGTGACTGCAACAACTTCTCCAACTGGGCAATCTGGAGCACCTATGTCATCCAATCAAGTCAAGTACTATGAACTTTTGGCACGGTATTATGTCTTGAAGCGGCAACATATGCTTGCAGCTCATGCATTGCTAAGACTAGCTGAACGACGTTCTGTTGATGGGGTTCCTACTCTTGAACAGAGGTGTCAATACCTAAGTAATGCAGTTCTACAAGCAAAAAGTGCAGCTAATAGTGATGGTTTAGTAGGTTCTGCTCGGAGTTCCATTGATAGTGGATTCTTAGATTTGCTTGAAGGGAAGCTTGCTGTTCTTCGGTTTCAGATAAAGATCAAAGAGGAATTGGAGGCAATGGCTTCCAGGAATGAGATTTTACCTAGCACATCTGATTCCATTCAAGATGGTGCAGTCCATGTGGGCAGTTCAACTGCCGATGCAAATTTTGCAAGCGTAGCACGAGAGAAGGCCATGGAGCTATCATCAGATGTAAAGAGCATAACACAATTATATAATGAATATGCTGTTCCCTTTGAACTCTGGGAGATATGCCTGGAGATGCTGTACTTTGCCAATTATTCTGGTGATGCTGACAGCATAATTGTCAGAGAGACATGGGCTAGACTTATTGATCAAGCTCTTTCAAGAGGTGGCATTGCTGAAGCTTGCTCGGTATTGAAGAGGGTTGGCCCCCGGATTTATCCTGGTGATGGAGCTGTTATACCACTCAACACTATTTGTCTTCACCTAGAGAAGTCTGCACTGGAGAGGTTAAACTCGGGGGCTGAATCTGTTGGTGATGAAGATGTTGCTAGAGCCCTTCTTTCTGCTTGCAAGGGTGCAGCTGAGCCTGTATTGAATACATATGACCAATTGTTATCAAATGGAGCTGTGTTGCCCTCCCCAAATCTTAGATTACGCATGCTGAGATCAGTCCTTGTGGTTCTTCGCGAGTGGGCAATGTCTGTATATTCACAGAGAATGGGTGCAAGTGCCTCCGGTTCTTCCCTCATACTAGGTTCAGGATTCCCACTTGAAAGAACAATTGTTAGCCAAGGAATTCGTGATAAGATCACAAGTGCGGCAAACAGGTACATGACTGAAGTGCGAAGGTTAGCCCTTCCCCAGAATCAAACAGAACATGTCTACCGAGGCTTTAGAGAACTCGAAGAGTCGCTTATAAAGGACATTTATGTAACTTCACGAAGTGTGGTTTTGTTAGAAGTTTCAACTTCAGCTTCGAGCTGGCCTGCACAATCGCACTCCACTTCCACGTCAATCGTTATCCCCCAAAAAAATCTTGACTTTCTGATTCCGTTTTGTGCTTTTGAGTATCCAAGTGCTTCCCAGCTTGCGGGTGTTGCCATGGCAGAGGTGATTCCGGCAGCCGTGCTCCGCAACCTTGCTGACAAACTGTACGAGAAGCGCAAGAACGCTGCACTTGATGTTGAGGGCATAGTGAAGCAGCTTGCTGCTGCTGGGGAGCATGAAAAAATAACGGCTGTGATCAATTTGTTGACAACGGAATTCACTTATTCTCCACAAGCCAATCACCGGAAGGGAGGATTAATAGGATTGGCTGCTGCAACTGTTGGGTTGACTTCCGATGCAGCTCAGCATCTTGAGCAAATTGTGCCCCCTGTTTTGAATTCCTTCTCTGACCAAGATAGCAGAGTTCGTTATTATGCTTGCGAAGCACTATATAACATAGCTAAGGTTGTGAGAGGGGATTTTATTGTATTCTTCAACCAGATCTTTGATGCCTTATGCAAGCTTTCTGCAGACTCGGATGCCAATGTACAAAGTGCTGCTCATCTCTTAGATCGACTGGTGAAGGTATTCATCACTCCTGCACGCCATATTGAAGAATTCATACCACTGTTGAGGGAGCGCATGAATGTATTGAATCCATATGTGCGCCAGTTTTTGGTAGGATGGATTACTGTATTGGACAGCGTCCCAGATATTGATATGCTGGGTTTTCTTCCTGATTTTCTTGATGGCTTGTTTAATATGTTGAGTGATTCAAGTCATGAAATACGTCAACAAGCTGATTCCGCTCTTTCAGAGTTTCTTCAAGAGATTAAGAACTCCCCATCTGTAGATTATGGTCGAATGGCTGAAATCCTGGTACAAAGGGCAGGTTCTCCAGATGAATTTACCAGGCTAACAGCTATCACATGGATAAATGAGTTTGTCAAACTTGGTGGAGACCAGCTTGTTCCGTATTATGCTGACATTCTTGGAGCCATTTTGCCTTGCATATCAGATAAAGAAGAGAAAATTCGAGTGGTTGCTCGTGAAACCAATGAAGAGCTACGTGCCATCAAGGCTGATCCAGCTGAAGCATTTGATGTGGGAGCGATACTCTCCATTGCTAGGAGCCAATTGTCAAGTGAATGGGAAGCTACTCGCATTGAAGCTTTGCACTGGATATCAACCCTTTTGAACAGACATCGCACTGAGGTTTTACAGTATCTGGGTGACATATTTGGTACCCTACTGACAGCACTTTCAGACCCATCCGATGAGGTTGTACTATTAGTTCTCGATGTTCATGCAGCTATTGCAAAAGATCCTCAGCACTTCCGGCAGATTGTTGTTTTCCTGGTGGACAAATTTCGGATAGACAATTCTCTTTTGGAGAAACGAGGTGCTTTGATAATTCGCCGACTTTGTGTTCTCTTGAATGCTGAGAGAGTCTATCGTGAACTTTCTACAATACTAGAAGGGGAACCTGATTTGGATTTTGCATCAATTATGGTTCAGGCTCTGAATTTGATTTTACTTACATCATTGGAACTATCTGAGATCCGAGATCTTTTGAAGCAATCACTGGTAAATCCTGCTGGGAAGGATCTATATATTTCTTTGTATGCATCGTGGTGCCATTCTCCAATGGCAATTATAAGTCTTTGCTTATTATCTCAGACTTACCAACATGCTAGCACTGTGATTCAATCTCTCGTTGAAGAAGACATTAATGTCAAATTTTTAGTCCAGCTGGATAAATTGATTCAGTTGCTGGAAACTCCAATATTTGCTTATCTAAGATTGCAGCTTCTTGAACCTGGAAGACATATATGGTTGTTTAAAGCATTGTATGGTCTTCTAATGTTGCTTCCTCAGCAAAGTGCCGCCTTTAAGATACTGAAAACTCGTTTAAAAGCCGTGCCGTCGTATTCTTTCAATGGCGAGCAACTAAAGAGAACACCCTCAGGGAATCCTTACCAGTTTCTTCATCAAATGCCTGGTGGCTCTCAAATCACCGAGGATGGCGACATAACCATGGATGGTGGAAACTCACATAACGGGATAAATTTTGCTGCAAGACTACAACAGTTTCAGCAAGTGCAGCACCTGCATCGTCTACATTCAAAAGCACAGGTGCAGTCACGCAAGAATTCGACCTCATTATCAAAGAATATGGTTGAAGCACAGAAACAAGAAGAACCAAGGAGACCGCAGTTGAGTGAAATTAATGTTCCAACTTCAAGATCATCATCAAAGAGAAGCCCCCAAGTGTAG 6777 0.4344 MSWEDEIVMRDVTNAGLVVSDRIGREVSSQLDLEEALEASRYASHPYSTLPREWPPLVEVANTWELPPVLIERYNAAGGEGTAFCGIFPEIRRAWASVDNSLFLWRFDKWDGQCPEYSGEEQAICAVGLAKSKPGVFVEAIQYLLVLATPVELILVGVCCSGGADGSDPFAEVTLQPLPEYTVPSDGVTMTCVTCTDKGRIFLAGRDSHIYELIYSTGSGWQKRCRKICLTAGLGSLISSWVIPNVFNFGAIDPIVEMVFDNERQILYARTEEMKLQVYVLGQNGDGPLKKVAEERNLVNQRDGHYGGRQSTGSRVSNRSPKPSIVCIAPLSTLESKLLHLVAVLSDGRRMYLSTSPSSANLTGFSTSHHRPSCLKVVATRPAPPWGVSGNLTFGAIALASRPQNEDLSLKVEAAYCSAGTLILSDASPSAMPSLLVLNRDSSTQLSPSGNLGTNSRSSRALRESVSSLPVEGRMLSVADVLPLPDTASTVQSLYSEIEFSGYESPMESCDRVSGKLWARGDLSTQHILPRRRIVIFSTMGMMEIVLNRPLDILRRLLESSSPRSVLEDFFNRFGAGEAAAMCLMLAARIVHSENLISNVIAEKAAEAFEDPRVVGMPQLEGSSALSNTRTAAGGFSMGQVVQEAEPVFSAAHEGLCLCSSRLLFPLWELPVMLVKGNLAPSGALSENGVVVCRLSVGAMQVLEHKIRSLEKFLRSRRNQRRGLYGCVAGLGDLSGSILYGTGSALGAGDRSMVRNLFGAYSRNVESNGGGTSNKRQRLPYSPAELAAMEVRAMECIRQLLLRSGEALFLLQLISQHHVTRLIQGFDANLQQALVQLTFHQLVCSEEGDRLATRLISALMEYYTGPDGRGTVDDISRRLREGCPSYYKESDYKFFLAVEALERAAVTIDDEEKENLAREAFNCLSKVPESADLRTVCKRFEDLRYYEAVVRLPLQKAQAIDPAGDAYNDEIDASVREQTLAQREQCYEIVISALRSLKGDNSHKEFGSPIRSAALQSTLDPASRKKYISQIVQLGVQSPDRIFHEYLYQAMIDLGLENELLEYGGPDLLPFLQSAGRKPIQEVRAVTATTSPTGQSGAPMSSNQVKYYELLARYYVLKRQHMLAAHALLRLAERRSVDGVPTLEQRCQYLSNAVLQAKSAANSDGLVGSARSSIDSGFLDLLEGKLAVLRFQIKIKEELEAMASRNEILPSTSDSIQDGAVHVGSSTADANFASVAREKAMELSSDVKSITQLYNEYAVPFELWEICLEMLYFANYSGDADSIIVRETWARLIDQALSRGGIAEACSVLKRVGPRIYPGDGAVIPLNTICLHLEKSALERLNSGAESVGDEDVARALLSACKGAAEPVLNTYDQLLSNGAVLPSPNLRLRMLRSVLVVLREWAMSVYSQRMGASASGSSLILGSGFPLERTIVSQGIRDKITSAANRYMTEVRRLALPQNQTEHVYRGFRELEESLIKDIYVTSRSVVLLEVSTSASSWPAQSHSTSTSIVIPQKNLDFLIPFCAFEYPSASQLAGVAMAEVIPAAVLRNLADKLYEKRKNAALDVEGIVKQLAAAGEHEKITAVINLLTTEFTYSPQANHRKGGLIGLAAATVGLTSDAAQHLEQIVPPVLNSFSDQDSRVRYYACEALYNIAKVVRGDFIVFFNQIFDALCKLSADSDANVQSAAHLLDRLVKVFITPARHIEEFIPLLRERMNVLNPYVRQFLVGWITVLDSVPDIDMLGFLPDFLDGLFNMLSDSSHEIRQQADSALSEFLQEIKNSPSVDYGRMAEILVQRAGSPDEFTRLTAITWINEFVKLGGDQLVPYYADILGAILPCISDKEEKIRVVARETNEELRAIKADPAEAFDVGAILSIARSQLSSEWEATRIEALHWISTLLNRHRTEVLQYLGDIFGTLLTALSDPSDEVVLLVLDVHAAIAKDPQHFRQIVVFLVDKFRIDNSLLEKRGALIIRRLCVLLNAERVYRELSTILEGEPDLDFASIMVQALNLILLTSLELSEIRDLLKQSLVNPAGKDLYISLYASWCHSPMAIISLCLLSQTYQHASTVIQSLVEEDINVKFLVQLDKLIQLLETPIFAYLRLQLLEPGRHIWLFKALYGLLMLLPQQSAAFKILKTRLKAVPSYSFNGEQLKRTPSGNPYQFLHQMPGGSQITEDGDITMDGGNSHNGINFAARLQQFQQVQHLHRLHSKAQVQSRKNSTSLSKNMVEAQKQEEPRRPQLSEINVPTSRSSSKRSPQV 2258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04363 2258 PANTHER BNAC05G49530D PROTEIN 2 1478 - -
Aip03g04363 2258 Gene3D - 1785 2012 IPR011989 -
Aip03g04363 2258 Gene3D - 531 883 - -
Aip03g04363 2258 MobiDBLite consensus disorder prediction 2241 2258 - -
Aip03g04363 2258 Pfam Vacuolar 14 Fab1-binding region 1600 1695 - -
Aip03g04363 2258 Pfam Nup133 N terminal like 54 507 IPR014908 -
Aip03g04363 2258 Gene3D - 1180 1419 IPR042538 -
Aip03g04363 2258 Gene3D - 1533 1784 IPR011989 -
Aip03g04363 2258 PANTHER NUCLEAR PORE COMPLEX PROTEIN NUP155 2 1478 IPR004870 GO:0005643|GO:0006913|GO:0017056
Aip03g04363 2258 Gene3D Nucleoporin, helical domain, central subdomain 1057 1154 IPR042537 -
Aip03g04363 2258 MobiDBLite consensus disorder prediction 443 464 - -
Aip03g04363 2258 MobiDBLite consensus disorder prediction 2208 2258 - -
Aip03g04363 2258 Pfam Vacuolar protein 14 C-terminal Fig4p binding 1962 2141 IPR021841 -
Aip03g04363 2258 ProSiteProfiles HEAT repeat profile. 1627 1662 IPR021133 -
Aip03g04363 2258 SUPERFAMILY ARM repeat 1547 2080 IPR016024 -
Aip03g04363 2258 Gene3D - 894 1054 IPR042533 -
Aip03g04363 2258 MobiDBLite consensus disorder prediction 2208 2228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04363 Aip-Chr3 128027268 128042416 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g04363 03 128027268 128042416 Aip03g04363 03 128027268 128042416 ECH