Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04362 ATGATGGAGTCTTCGAAGGCTCTGCGGTTCATAACACACCAATCGTTGTTCTCGACCGTTCGATCTGGAGACCTTGATGAGCTGAAGAAGCTGGTGGAGCAGCTGAGAAAGGAAGAGTCTTGTTCTTGTGCTTCAGATGCATCATCTTCATCGATTTCTGACGACGTGTTCAGCTTCTTGCTCAAACTCTGTGACTTCGAGATAGTGAAGATCAGGTCCAAGTCTGACATGAACGCCTTTCATGTTGCAGCCAAGCGTGGTCATCTTGATATTGTGAGGGAGTTTTTGAGTACTTGGCCAGAGCTTTGTAAGTTATCTGACTCATCAAACACCAGCCCGCTATATTCGGCTGCTGTTCAAGATCATCTGGATGTGGTCAATGCTATCTTGGAAGTCGACGCCAGTTCCATGATGATAGTTAGGAAAAATGGGAAAACTTCCCTGCACAATGCTGCTAGGTATGGTATGGTTCGAATTGTGAAAGTTCTTATTGCCCGGGATCCAGCAATAGTCTCCATCAAAGATAAAAAAGGTCAAACTGCACTTCACATGGCTGTCAAAGGACAGTGTAGTGCAGTGGTGGAGGAGATATTACAAGCTGATCCAACTATACTGAACGAACGGGACAAGAAAGGCAATACAGCTCTTCACATGGCTACGAGGAAAGGCCGTGAGCAGATTGTGACCCTTTTGCTATGCTATACCGCCATGGAAGTTAACGCCATCAATAAGCAGCAGGAAACAGCTTTGGATTTGGCAGATAAGCTGCCGTATGGAGATCCGTCTTTGGTAATTAAGGAAGCCCTTGCAGAGTATGGTGCCAAGCATGCCAGGAATGTCGGAAAAATAGATGAAGCCATGGAACTCAAAAGAACTGTCAGTGACATAAAACATGAGGTGCAGTCACAACTTATACAAAATGAAACTACTCGTAGACGAGTTTCTGGAATTGCCAAGGAACTGAAGAAACTTCACAGGGAAGCAGTTCAGAACACCATTAATTCTGTCACAGTCGTAGCTGTCCTTTTTGCCTCAATAGCATTCCTGGCCATATTCAATTTGCCTGGTCAGTATATAACAGGAGGATCAGATGCAGGGAAGGCCAATATTGCCAATCGTCTCGGCTTCAAAGTTTTCTGCCTTCTGAATTCTACATCTCTCTTCATCTCACTTGCAGTCGTCGTAGTTCAAATCACTTTAGTAGCATGGGACACAAGGGCTCAAAGGCAGGTTGTATCAGTGGTTAACAAGCTAATGTGGGCTGCATGTGCTTGCACATGTGGTGCTTTTCTTGCAATAGCTTTTGAGGTTGTTGGAGAACACACATGGATGGCCTTGACCATCACCATTTTGGGAGTACCAATTCTAGTTGGAACACTAGCAAGCTTGTGCTACTTTGTTTTTCGACAACATTTTGGTGTTTTCCGCAGCGATTCACAGAGGCGAATCAAGAGAGCTAGCGGAAGCAAATCTTTTTCATGGTCGTACTCTGCAAATATATCAGACTTGGACGAATATAATTCCGACATTGAAAGGATCTATGCTCTGTGA 1551 0.4455 MMESSKALRFITHQSLFSTVRSGDLDELKKLVEQLRKEESCSCASDASSSSISDDVFSFLLKLCDFEIVKIRSKSDMNAFHVAAKRGHLDIVREFLSTWPELCKLSDSSNTSPLYSAAVQDHLDVVNAILEVDASSMMIVRKNGKTSLHNAARYGMVRIVKVLIARDPAIVSIKDKKGQTALHMAVKGQCSAVVEEILQADPTILNERDKKGNTALHMATRKGREQIVTLLLCYTAMEVNAINKQQETALDLADKLPYGDPSLVIKEALAEYGAKHARNVGKIDEAMELKRTVSDIKHEVQSQLIQNETTRRRVSGIAKELKKLHREAVQNTINSVTVVAVLFASIAFLAIFNLPGQYITGGSDAGKANIANRLGFKVFCLLNSTSLFISLAVVVVQITLVAWDTRAQRQVVSVVNKLMWAACACTCGAFLAIAFEVVGEHTWMALTITILGVPILVGTLASLCYFVFRQHFGVFRSDSQRRIKRASGSKSFSWSYSANISDLDEYNSDIERIYAL 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04362 516 PANTHER ANKYRIN REPEAT PLANT-LIKE PROTEIN 4 516 - -
Aip03g04362 516 ProSiteProfiles Ankyrin repeat profile. 143 175 IPR002110 GO:0005515
Aip03g04362 516 ProSiteProfiles Ankyrin repeat region circular profile. 143 164 - -
Aip03g04362 516 Coils Coil 503 516 - -
Aip03g04362 516 Gene3D - 11 294 IPR036770 -
Aip03g04362 516 Pfam Ankyrin repeats (3 copies) 54 132 IPR002110 GO:0005515
Aip03g04362 516 Pfam Ankyrin repeats (3 copies) 148 241 IPR002110 GO:0005515
Aip03g04362 516 PANTHER PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 4 516 - -
Aip03g04362 516 Pfam Domain of unknown function 327 434 IPR026961 -
Aip03g04362 516 ProSiteProfiles Ankyrin repeat profile. 211 232 IPR002110 GO:0005515
Aip03g04362 516 SUPERFAMILY Ankyrin repeat 16 256 IPR036770 -
Aip03g04362 516 SMART ANK_2a 75 104 IPR002110 GO:0005515
Aip03g04362 516 SMART ANK_2a 109 139 IPR002110 GO:0005515
Aip03g04362 516 SMART ANK_2a 177 206 IPR002110 GO:0005515
Aip03g04362 516 SMART ANK_2a 143 172 IPR002110 GO:0005515
Aip03g04362 516 SMART ANK_2a 211 241 IPR002110 GO:0005515
Aip03g04362 516 ProSiteProfiles Ankyrin repeat region circular profile. 211 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04362 Aip-Chr3 128021303 128026355 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g04362 6 516 Miscellaneous Gene Families AT2G01680 67.978 0.0 711
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g04362 03 128021303 128026355 Aip03g04362 03 128021303 128026355 ECH