Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g03986 ATGAGGAAGAAGAAAACCACCTACAACTCCAAAACCACAAAGCTCAAAACTTTACCCATTTTCCTATGTGGCTTCCACTTCCTCTCCTTAATCCTCCTTACCCACTCCCAACCCGCCTTCCCAGACGCACAAGCAATGCTAGCACTCAAACATGCACTAAACCCACCCGAATCACTTGGCTGGTCCGACCCGAACCCATGCAAATGGAGTCGCGTCTCCTGCTCCGATTCCAACCGGGTCACCCGGATCCAAATCGGACGCCAAGGACTTGATGGCACAATTCCCAACAACACCCTCCAAACCCTGACCCAGTTGGAGCGCCTTGAGCTTCAGTTCAACAACATTTCGGGTCCACTACCGGACCTATCCGGGTTGGGTTCGCTCCAAGTCCTTATTCTGAGTAACAATGGCTTCACTTCCATTCCTGCAGGTTTCTTCGCCGGAATGTCACAGCTTCAGGCGGTGGAAATCGACGACAACCCTTTTCAGGCGTGGCAGATTCCTCTGTCTCTGCAGAACGCTTCGGCGCTTCAGAACTTCTCAGCGAATAGCGCTAACATAGTTGGAAAAATCCCAGATTTTTTCAACTCTGACGTGTTTCCCGGGTTGAGCCATTTGCATTTAGCGATAAACAGCATCGAGGGTACGTTGCCTTCGGGGTTTTCCAGTTTGGAACTTCAGACTCTGTGGATGAACGGGCAAAAGGGTGATGCGAAGCTTGGTGGGGACGTTGATGTTTTGCAGAACATGACGTCACTGACGCAGGTTTGGTTGCACCAGAACTCGTTTTCTGGGCCTTTGCCCGATTTTTCTGGCTTCCAACACTTGGAAGATTTGAGCTTGAGGGATAACTCTTTCACGGGTCCTGTCCCTCCCTCTCTGCAGAGCCTAAAGTCGCTCAAAGTCGTGAACTTGACTAATAACTTGTTGCAGGGTCCAGTTCCTGTGTTTGGTTCTGGTGTTGTAGTTGATATGAGTGGTTTGAACAGTTTCTGTTTGACTAAACCCGGTAATTGTGATTCCAGAGTGAATGCTCTACTTTCTATTGTTAGGTCTATGGGTTATCCCCAAAGGTTTGCTGAGAATTGGAAAGGGAATGATCCTTGTAATGATTGGATTGGGATTACTTGTAGTAATGGGAACATTTCAGTTATTAATTTTCAGAAGATGGGGCTTAACGGCACGATATCGCCCGATTTTGCATCACTCAAGTCACTGCAAAGGTTGGTTCTTGCTGATAATAACCTGACTGGTCCAATCCCTGAGGAGCTAGCTGCTCTTCCTGTTCTTACTCAGCTGAATGTTGCAAACAATCAGCTTTATGGGAATGTTCCAAAGTTTAAGAGCAGTGTAGCTGTTACCATAAGTGGTAACAAGGATATAGGGAAGGATAAGCCTAGCCCGTCCCCTCCAGGTTCGTCTCCAAATTCAACTGCTCCAAACACAATAGAAGGGAATGGTGGCCAAAAGAAGTCTTCGCATGTACTAGTGATTGTTATTGCTGTGGTTGGAGGTGTATTGTTGATTGCTTTGATTGCTTTATTGGCTTTCTGCTTGTATAGGATGAAGCAGAAACGGCTGAGCAAGGTGCAGAGTCCGCGTGAGCTAGTTGTCCACCCTCGTCATTCTGGGTCGGACAATGAAAGTGTGAAGATAACTGTTGCGGGTTCAAGTGTCAGTGTTGGTAATGTTAGTGAATCGCAAACTGTGCCTGGCAGCGAAGGAAGGGATATCCAGATGGTCGAAGCGGGAAATATGGTCATTTCTATACAAGTCCTGAGGAATGTCACTAACAATTTCAGTGAGCAAAATATATTGGGGCAAGGAGGTTTTGGAACAGTTTATAAAGGTGAATTACATGATGGCACAAAAATTGCAGTGAAAAGAATGGAGATTGGAGCAATATCCGGTAAGGGGGCGGCAGAATTTAAGTCTGAAATTGCTGTTTTGACTAAGGTTCGCCACCGGCATCTTGTCTCGCTTCTCGGCTACTGCTTGGATGGGAATGAGAAGCTTCTTGTGTATGAGTACATGCCTCAGGGGACGTTAAGTAGGCATCTTTTTAATTGGTTAGAAGAAGGACTAAAGCCGTTGGAGTGGAATAGAAGATTAACCATTGCATTGGATGTGGCAAGGGCTGTCGAGTATCTTCATAGCTTGGCCCATCAAAGCTTCATACATAGGGACTTAAAGCCTTCAAACATTCTCCTTGGAGATGATATGAGGGCAAAGGTTGCAGATTTTGGTCTTGTGCGACTTGCTCCAGAAGGCAAGGCTTCAATAGAAACAAGAATTGCAGGAACTTTTGGGTATTTGGCTCCAGAATATGCAGTTACCGGCCGAGTCACAACCAAGGTTGATGTGTTCAGCTTTGGTGTGATATTGATGGAACTATTAACCGGAAGAAGAGCACTTGACGAGACCCAGCCGGAGGATAGTGTGCACCTCGTTACATGGTTCCGCAGAATGTACATAAACAAGGACACATTCCGAAAGGCCATTGACCCCACAATCGAGCTTGACGAGGAAACGCTGGCTAGTGTACACACCGTGGCAGAGCTAGCCGGCCACTGCTGTGCGAGGGAGCCATATCAAAGGCCTGACATGGGTCATGCTGTCAACGTGCTTGCTTCTCTTGTAGAACTCTGGAAACCATCTGATCAGAACCCCGAAGACATATACGGCATTGACCTCGACATGTCTTTGCCGCAAGCGCTTAAGAAATGGCAGGCTTACGAAGGTGGAAGCCAAATGGAGTCGTCGTCTTCTTCGCTCCTACCAAGCTTGGACAACACGCAGACAAGCATACCTACCCGTCCTTACGGATTCGCCGAATCTTTCACCTCAGCAGATGGGAGGTGA 2862 0.4734 MRKKKTTYNSKTTKLKTLPIFLCGFHFLSLILLTHSQPAFPDAQAMLALKHALNPPESLGWSDPNPCKWSRVSCSDSNRVTRIQIGRQGLDGTIPNNTLQTLTQLERLELQFNNISGPLPDLSGLGSLQVLILSNNGFTSIPAGFFAGMSQLQAVEIDDNPFQAWQIPLSLQNASALQNFSANSANIVGKIPDFFNSDVFPGLSHLHLAINSIEGTLPSGFSSLELQTLWMNGQKGDAKLGGDVDVLQNMTSLTQVWLHQNSFSGPLPDFSGFQHLEDLSLRDNSFTGPVPPSLQSLKSLKVVNLTNNLLQGPVPVFGSGVVVDMSGLNSFCLTKPGNCDSRVNALLSIVRSMGYPQRFAENWKGNDPCNDWIGITCSNGNISVINFQKMGLNGTISPDFASLKSLQRLVLADNNLTGPIPEELAALPVLTQLNVANNQLYGNVPKFKSSVAVTISGNKDIGKDKPSPSPPGSSPNSTAPNTIEGNGGQKKSSHVLVIVIAVVGGVLLIALIALLAFCLYRMKQKRLSKVQSPRELVVHPRHSGSDNESVKITVAGSSVSVGNVSESQTVPGSEGRDIQMVEAGNMVISIQVLRNVTNNFSEQNILGQGGFGTVYKGELHDGTKIAVKRMEIGAISGKGAAEFKSEIAVLTKVRHRHLVSLLGYCLDGNEKLLVYEYMPQGTLSRHLFNWLEEGLKPLEWNRRLTIALDVARAVEYLHSLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKASIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELLTGRRALDETQPEDSVHLVTWFRRMYINKDTFRKAIDPTIELDEETLASVHTVAELAGHCCAREPYQRPDMGHAVNVLASLVELWKPSDQNPEDIYGIDLDMSLPQALKKWQAYEGGSQMESSSSSLLPSLDNTQTSIPTRPYGFAESFTSADGR 953
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g03986 953 Pfam Protein kinase domain 601 874 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g03986 953 PANTHER RECEPTOR PROTEIN KINASE TMK1 27 953 - -
Aip03g03986 953 Pfam Leucine rich repeat N-terminal domain 42 75 IPR013210 -
Aip03g03986 953 Pfam Leucine rich repeat N-terminal domain 342 378 IPR013210 -
Aip03g03986 953 Gene3D Ribonuclease Inhibitor 340 465 IPR032675 -
Aip03g03986 953 ProSitePatterns Serine/Threonine protein kinases active-site signature. 725 737 IPR008271 GO:0004672|GO:0006468
Aip03g03986 953 MobiDBLite consensus disorder prediction 917 953 - -
Aip03g03986 953 ProSitePatterns Protein kinases ATP-binding region signature. 606 628 IPR017441 GO:0005524
Aip03g03986 953 CDD STKc_IRAK 606 876 - -
Aip03g03986 953 SMART serkin_6 600 880 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g03986 953 SMART LRR_typ_2 102 124 IPR003591 -
Aip03g03986 953 SMART LRR_typ_2 125 148 IPR003591 -
Aip03g03986 953 SMART LRR_typ_2 403 427 IPR003591 -
Aip03g03986 953 Gene3D Ribonuclease Inhibitor 41 335 IPR032675 -
Aip03g03986 953 PANTHER OSJNBA0070M12.3 PROTEIN 27 953 - -
Aip03g03986 953 MobiDBLite consensus disorder prediction 917 942 - -
Aip03g03986 953 Gene3D Phosphorylase Kinase; domain 1 561 677 - -
Aip03g03986 953 Gene3D Transferase(Phosphotransferase) domain 1 678 894 - -
Aip03g03986 953 MobiDBLite consensus disorder prediction 458 489 - -
Aip03g03986 953 SUPERFAMILY L domain-like 57 447 - -
Aip03g03986 953 ProSiteProfiles Protein kinase domain profile. 600 879 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g03986 953 SUPERFAMILY Protein kinase-like (PK-like) 588 889 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g03986 Aip-Chr3 123160505 123164472 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g03986 83 889 Receptor kinase-like Gene Family AT1G55610 29.220 3.94e-85 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Aip03g03986 Pkinase 5.7e-47 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g03986 03 123160505 123164472 Aip03g03986 03 123160505 123164472 ECH