Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g03962 ATGGTGGCTTTAGTTTCCCAGGAAAATGTCGTCGCATTGGTTTCTCGTACCGGTCGGGAGTTACAGCGTTACAGAAAAGGTCGTCGCCAAGTTGTGGGATGCATACCATATAGATATAAGATTGAGGAGAAAACTTGGTTGGGCGATTTAGACGAATTGGAAGTTCTGGTTATTAGTTCTCAGAAAGGCAAAGGAATGCTATTCCCAAAGGGAGGGTGGGAACTTGATGAATCCAAAAAGGAGGCAGCTTTGCGAGAGACCATAGAGGAAGCTGGGGTGCGAGGCATTGTTGGGGGTAAATTGGGGAAATGGAGCTTCAAGAGCAAAACCCATGATACCTTCTATGAAGGGTACATGTTCCCACTTCTTGTTGAAGAGCAACTTGAGTTCTGGCCAGAGCAGAACGTTCGTCAAAGAACATGGATGAGTGTATCTGAGGCAAGAGAAGTTTGTCAACACTGGTGGATGAAGGAAGCACTAGACAGACTTGTAAACCGTCTCACGGGTCAAAAACTACTTGGTCGTGAAACAAAGCAAGTTCTAAGTTGCATAGCATCAGATATGTCCAATTGCCAAATCTGA 582 0.4519 MVALVSQENVVALVSRTGRELQRYRKGRRQVVGCIPYRYKIEEKTWLGDLDELEVLVISSQKGKGMLFPKGGWELDESKKEAALRETIEEAGVRGIVGGKLGKWSFKSKTHDTFYEGYMFPLLVEEQLEFWPEQNVRQRTWMSVSEAREVCQHWWMKEALDRLVNRLTGQKLLGRETKQVLSCIASDMSNCQI 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g03962 193 PANTHER DIPHOSPHOINOSITOL POLYPHOSPHATE PHOSPHOHYDROLASE 6 172 - -
Aip03g03962 193 CDD Nudix_Hydrolase_9 30 157 - -
Aip03g03962 193 PANTHER NUDIX HYDROLASE-LIKE PROTEIN 6 172 - -
Aip03g03962 193 Pfam NUDIX domain 54 161 IPR000086 -
Aip03g03962 193 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 14 167 - -
Aip03g03962 193 ProSiteProfiles Nudix hydrolase domain profile. 27 164 IPR000086 -
Aip03g03962 193 ProSitePatterns Nudix box signature. 71 92 IPR020084 GO:0016787
Aip03g03962 193 SUPERFAMILY Nudix 21 167 IPR015797 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g03962 Aip-Chr3 122809366 122810857 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g03962 03 122809366 122810857 Aip03g03962 03 122809366 122810857 ECH