Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g03961 ATGGCTCTCTCTCTATCGCTCCTGGCCCTCATTGTCTTTTCTCTCTCCTCACAGTTACTCCCTTCCTCTTCTTATTCCGTACCGGTGGACACCTTCGTTTATGGCGGCTGCACGCAACAAAGGTATAATCCAACCTCGCCGTACGAGTCAAACCTCAACTCGCTACTTGGCTCGCTGGTCAACTCAGCCACATTCTCCGCCTACAACAACCTCACCGTCCTTTCATCTTCGCAAAGTGGCGTCGCCTACGGTCTATACCAGTGCCGAGGCGACCTCGCCATGCAAGACTGCGCCACCTGCGTCGCACGTGCCGTCTCACGAGCTGGCGAGCTCTGTCCAGGAGCGTGCGGCGGCGCCGTCCAGCTCGACGGCTGCTTCGTCAAGTACGACAACGTCGCGTTCCTTGGGGTGGAGGACAAGTCGCTGGTACTGAGGAAGTGCGGCTCGCATTCGGCCGGGTTCTCGACCGGTGGGGCCCATGGGGGGTACTACAACTCAAAAGCCCATGGTAGATCGGACAATGAAGGTGAGAAGACATTTGCAATAATTATTGGATTATTAGCAGGTGTAGCTTTACTCATTATTTTCCTTGCTTTCTTGAGGAGAATTTGTGAAGGACAAGAATTTAACCAAGAGTTCGATTTCACGAGAATATCAAGCCCCTTATATTCATACCAATATCCGTAA 687 0.5269 MALSLSLLALIVFSLSSQLLPSSSYSVPVDTFVYGGCTQQRYNPTSPYESNLNSLLGSLVNSATFSAYNNLTVLSSSQSGVAYGLYQCRGDLAMQDCATCVARAVSRAGELCPGACGGAVQLDGCFVKYDNVAFLGVEDKSLVLRKCGSHSAGFSTGGAHGGYYNSKAHGRSDNEGEKTFAIIIGLLAGVALLIIFLAFLRRICEGQEFNQEFDFTRISSPLYSYQYP 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g03961 228 Pfam Salt stress response/antifungal 37 131 IPR002902 -
Aip03g03961 228 PANTHER PLASMODESMATA-LOCATED PROTEIN 5 152 205 - -
Aip03g03961 228 Gene3D - 29 134 IPR038408 -
Aip03g03961 228 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 4 154 - -
Aip03g03961 228 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 152 205 - -
Aip03g03961 228 ProSiteProfiles Gnk2-homologous domain profile. 30 134 IPR002902 -
Aip03g03961 228 PANTHER PLASMODESMATA-LOCATED PROTEIN 5 4 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g03961 Aip-Chr3 122799031 122801244 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g03961 31 136 Receptor kinase-like Gene Family AT4G05200 32.110 1.50e-11 61.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g03961 03 122799031 122801244 Aip03g03961 03 122799031 122801244 ECH