Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g02139 ATGACTGGCAGAGAAATCCTCCACAAGATGAAGGAAAAAGTGTTGGGGTCATCAGATCCTGATTCAGGGAAAGGAAAGAGCAAGATGTCTAAGAACATAACTCATGGCTTCCATTTGGTAAAGGGAAGATCAGATCATGCTATGGAAGACTATCTTGTTGCTCAATTTAAGCAAGTCGAAAATAATGAGTTGGGTTTGTTTGCAATATTTGATGGCCACTCTGGTCACAGTGTACCTGATTACTTGCGGTCTCATTTGTTCGATAACATCATAAATGAGCCTGACTTCTGGACAGACGCTGCTAATGCTGTGAAGAGAGCCTATAGTGTAACTGATTCTACTATTTTGGAGAAATCAGGTGAATTGGGCAGAGGGGGTTCAACTGCTGTTACAGCAATATTGATTAATTGTCAGAAGCTAATAGTGGCTAACATTGGGGACTCTCGGGCTGTCTTATCGGTGAATGGCAAGGCCAAACAACTATCTGTGGATCATGAACCAAACACAGAATGGGAGGACATCAAGAACAGAGGTGGTTTCGTTTCTAACTTCCCAGGGGATGTTCCACGGGTTGATGGGCAATTGGCAGTGTCGAGGGCATTCGGTGACAAAAGCCTGAAGAAACACTTGAGCTCTGATCCATATGTGACAGTGGAGCTCATAGGTGATGGTGCAGAGTTTATCATATTAGCCAGTGATGGTTTATGGAAGGTAATGTCAAATCAAGAAGCAGTTGATGCTATCAAAGACATAAAAGATGCTCGGTCTGCAGCAAAACACCTTACTGAAGCAGCAGTTAACAGGAAAAGCTCAGATGATATCTCTTGTGTTGTTGTGAGATTTCAGTGA 849 0.4287 MTGREILHKMKEKVLGSSDPDSGKGKSKMSKNITHGFHLVKGRSDHAMEDYLVAQFKQVENNELGLFAIFDGHSGHSVPDYLRSHLFDNIINEPDFWTDAANAVKRAYSVTDSTILEKSGELGRGGSTAVTAILINCQKLIVANIGDSRAVLSVNGKAKQLSVDHEPNTEWEDIKNRGGFVSNFPGDVPRVDGQLAVSRAFGDKSLKKHLSSDPYVTVELIGDGAEFIILASDGLWKVMSNQEAVDAIKDIKDARSAAKHLTEAAVNRKSSDDISCVVVRFQ 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g02139 282 PANTHER PROTEIN PHOSPHATASE 2C 39-RELATED 1 282 - -
Aip03g02139 282 Gene3D - 16 282 IPR036457 -
Aip03g02139 282 SUPERFAMILY PP2C-like 30 281 IPR036457 -
Aip03g02139 282 Pfam Protein phosphatase 2C 45 274 IPR001932 -
Aip03g02139 282 CDD PP2Cc 35 281 IPR001932 -
Aip03g02139 282 SMART PP2C_4 24 279 IPR001932 -
Aip03g02139 282 PANTHER PROTEIN PHOSPHATASE 2C 1 282 IPR015655 GO:0004722|GO:0006470
Aip03g02139 282 ProSiteProfiles PPM-type phosphatase domain profile. 34 281 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g02139 Aip-Chr3 31583334 31588902 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g02139 1 282 PP2C-type Phosphatase Gene Family AT3G15260 74.394 3.67e-159 442
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g01479 08 24798308 24800747 Aip03g02139 03 31583334 31588902 PCT