Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g02048 ATGGTTTTGCCCATATTTTTCTCAACCTTACTCATAGGAGGACTACTAGCCTCTAAACTCATTTGGCAATGGTTCATACAAAAAATTTTATCTTTGCATAATAAGCACCCCAAACTCCCTCCTGGCCCACCAAGGTTGCCAATCGTTGGCAATCTTCTCCAATTAGGGCAACTTCCACATAGAGATTTAGCATCTTTATGCGATAAATATGGACCCTTAGTTTATCTTAAATTGGGTAACATTGATGCAATTACTACTAATGATCCTGATATCATACGCGAAATACTTGTTCGCCAAGATGATGTTTTTGCCTCTCGTCCACACACTCTTGCCGCTGTTCATTTAGCCTATGGGTGTGGGGACGTTGCATTGGCCCCTTTAGGCCCACATTGGAAGCGAATGAGAAGAATTTGCATGGAACATTTGTTAACCACAAAGAGACTTGAATCCTTCTCAAAACATCGTCAAGATGAAGCTAACCACCTTGTTAAGGATGTTTGGGCTAAAGCCCAAACCGGAAAGCCCATTAACTTGAGAGAAGTGTTGGGTGCATTTTCAATGAACAATGTCACTAGAATGTTGCTAGGAAAGCAATATTTTGGATCTAAATCAGCAGGCCCACAAGAGGCTATGGATTTCATGCACATAACCCATGAATTGTTTTGGTTATTGGGTGTCATATACTTGGGTGACTACTTGCCAATTTGGAGGTGGGTGGATCCTTATCAATGTGAAAGGAAAATGAAGGAAGTGGAAAAGAAAGTGGATGATTTTCACACCAAAATTATTGAAGAACATAGAAAAGCAAGAATTGAGAAGAAGAAGAAGAATAATAATATGGGAATAGAAGATGATGAAGAAATGGATTTTGTGGATATTTTACTATCACTGCCAGGCGAAGATGGAAAAGCGTGTTTGGATGATACAGAAATCAAAGCTTTGATTCAGGATATGATAGCTGCAGCAACAGATACTTCGGCGGTGACGAATGAATGGGCAATGGCTGAGGTAATCAAACATACCCATGTCCTTCGTAAAATTCAAGAAGAGCTTGATATAGTAGTGGGTCCCAATAGAATGGTGATGGAATCTGATTTAGTCCACCTTAATTACCTGCGATGCGTTGTACGTGAAACATTTCGGATGCACCCAGCAGGGCCTTTCCTCATTCCACATGAATCTCTTCGTGACACCACCATCAACGGCTTTGATATACCTGCAAAGACACGTGTCTTCATCAACACCCATGGTTTGGGGCGTAACACTAAGATTTGGGACACTGTGGAGGAGTTTAGGCCCGAAAGGCACTTGCTAGTTGACGGGAGTAGGGTTGAGATTAGCCATGGAGTAGATTTCAAAATACTACCCTTTAGTGCTGGAAAAAGGAAATGTCCCGGTGCACCACTTGGAGTCACCTTGGTTTTAATGGCTTTGGCTCGACTTTTTCATTGCTTCGATTGGGCTCCGCCACGTGGCTTAAATCCTCAAGATATTGATACAAGGGAAGTCTATGGAATGACCATGCCTAAGGTTGAGCCCTTGATTGCTTTTGCTAGTCCACGGTTACCAAAACATTTGTATGATTAA 1587 0.4178 MVLPIFFSTLLIGGLLASKLIWQWFIQKILSLHNKHPKLPPGPPRLPIVGNLLQLGQLPHRDLASLCDKYGPLVYLKLGNIDAITTNDPDIIREILVRQDDVFASRPHTLAAVHLAYGCGDVALAPLGPHWKRMRRICMEHLLTTKRLESFSKHRQDEANHLVKDVWAKAQTGKPINLREVLGAFSMNNVTRMLLGKQYFGSKSAGPQEAMDFMHITHELFWLLGVIYLGDYLPIWRWVDPYQCERKMKEVEKKVDDFHTKIIEEHRKARIEKKKKNNNMGIEDDEEMDFVDILLSLPGEDGKACLDDTEIKALIQDMIAAATDTSAVTNEWAMAEVIKHTHVLRKIQEELDIVVGPNRMVMESDLVHLNYLRCVVRETFRMHPAGPFLIPHESLRDTTINGFDIPAKTRVFINTHGLGRNTKIWDTVEEFRPERHLLVDGSRVEISHGVDFKILPFSAGKRKCPGAPLGVTLVLMALARLFHCFDWAPPRGLNPQDIDTREVYGMTMPKVEPLIAFASPRLPKHLYD 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g02048 528 Gene3D Cytochrome P450 25 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g02048 528 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g02048 528 PRINTS E-class P450 group I signature 91 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g02048 528 PRINTS E-class P450 group I signature 310 327 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g02048 528 PRINTS E-class P450 group I signature 330 356 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g02048 528 PRINTS E-class P450 group I signature 373 391 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g02048 528 PRINTS E-class P450 group I signature 414 438 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g02048 528 PRINTS E-class P450 group I signature 454 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g02048 528 PRINTS E-class P450 group I signature 464 487 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g02048 528 PANTHER CYTOCHROME P450 703A2-RELATED-RELATED 22 527 - -
Aip03g02048 528 PRINTS P450 superfamily signature 321 338 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g02048 528 PRINTS P450 superfamily signature 374 385 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g02048 528 PRINTS P450 superfamily signature 455 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g02048 528 SUPERFAMILY Cytochrome P450 40 521 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g02048 528 Pfam Cytochrome P450 40 511 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip03g02048 528 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 457 466 IPR017972 GO:0005506|GO:0016705
Aip03g02048 528 PANTHER CYTOCHROME P450 703A2-RELATED 22 527 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g02048 Aip-Chr3 29419593 29421971 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g02048 1 527 EF-hand Containing Proteins AT1G01280 74.669 0.0 779