Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g02003 ATGCTAAAGGAATTCATTACACAAGCAGAGGTTGGTGTAGGGTTAGAAACCCTGTGGACAGCTTTCGCAAAGGATTTTCCAAACATAGTTCCGAAAGCTCTCCCAGATATTGTGAAAGATGTGCAGCTGACCCAAGGCAATGGAGGAATTGGAACGATCCTCATCTTTAATTTTTTGCCTGATGCAAGAAGTGTAACTCATTACCAGAGGGAGAAGATCACTGAATTTGATGAAGTTAACCATGAAATTGGGCTGCAAGTGATTGAAGGGGGTTATCTGAATCAAGGTTTAACATACTACAAGACTACTTTTCAACTTTCTTCAATAGAAGATCATCGGACTTTGGTCAACGTGAAAATCTCCTATGACCATGAATCATCATCAGAGGTAGAAGAAAGTGTCAAGACATTGAAGACATCGCAGTCCACTTTATTCTTTCTTAAAAGCCTAGAAAAATATCTGTTGAATGAGGCTTGA 477 0.3941 MLKEFITQAEVGVGLETLWTAFAKDFPNIVPKALPDIVKDVQLTQGNGGIGTILIFNFLPDARSVTHYQREKITEFDEVNHEIGLQVIEGGYLNQGLTYYKTTFQLSSIEDHRTLVNVKISYDHESSSEVEESVKTLKTSQSTLFFLKSLEKYLLNEA 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g02003 158 Pfam Pathogenesis-related protein Bet v 1 family 7 157 IPR000916 GO:0006952
Aip03g02003 158 CDD Bet_v1-like 3 123 - -
Aip03g02003 158 PANTHER PHYTOHORMONE-BINDING PROTEIN 3 157 - -
Aip03g02003 158 PANTHER - 3 157 - -
Aip03g02003 158 PRINTS Major pollen allergen Bet V1 signature 25 35 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Aip03g02003 158 PRINTS Major pollen allergen Bet V1 signature 49 58 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Aip03g02003 158 PRINTS Major pollen allergen Bet V1 signature 86 99 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Aip03g02003 158 PRINTS Major pollen allergen Bet V1 signature 146 156 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Aip03g02003 158 Gene3D - 1 158 IPR023393 -
Aip03g02003 158 SUPERFAMILY Bet v1-like 4 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g02003 Aip-Chr3 28375445 28376613 Dispersed/Transposed