Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy7g0024 ATGGAAGCAGTGACAGTTGTTCCCATGGTTTCCTCAGAAGAAACTGCAGATCACAATGTTCCTTATGCTATACCACTGCAGAGAGCAAGTCCTCATAGTGATATTACAGAATCACAAGGGATTCATGGAGCTGAAACCCCTTCGTCCAAGCAAAAGGAAGAAACAAGTATTCCTTCTGCTGTGGCTCAAAACAAAGTGAAGGATTCTGATGTTACTGCTTCTGCATTGCAATCAGATCGGCAACGAAGCACACACATTGCAGCATCAGTTGAAAAACTTGTGCAAAGCCCTGATACACCTTTCCGTGAAAAACGTCATCCATCACAATCTGGTCATGACAGTCCCTCAATAATACGTGAAAGGGTATCAAAAGATGGGTATAACTGGCGAAAATATGGCCAGAAAAATGTTAAAGGGAATGAATTTATAAGGAGCTATTACAAGTGTACGCATCCGAACTGCCAGGCAAAGAAACAGTTAGAGCAGTCAAACGATGGCCAGATTACAGATTCCATTTGCATTGGTCAGCATAATCATCCTAGGCCTCAATCCAGCATCACAAAGCCTGTTGGTCCTGTTCTTCCTGTTCTTGAAGAAGGACCAGACAAGCCCCGTGTCGCCAATGTAGAAGTTGAAGACAAATCATTGAATGAGCATGCAAGTGTACCTCAACAGATGAAGTTTTCACACTCCCTTCAGATTACAAATGTTCCTGCAGCTGATCTGATGAAAGCTGAACATTCACAACTGACCACAGCAAATGACGAGGTTCACAACAATGACTATCCTGACTCAAAACGGCAGAAGATAGACGATAGTAATATTGAAGTCAGTGTAGCTGACAAGTCAACTTGTGCGTCTCGTGTTGTCGTTCAAACTTCAAGTGAGGTTGATTTTGTAAATGATGGGTACCGTTGGCGCAAATATGGTCAGAAACTAGTTAAAGGAAATGCAAATCCCAGAAGTTATTATCGATGCTCTAGTCCCGGATGCCCTGTCAAAAAGCATGTGGAAAGGGCCTCTCATGATTCAAAAGTTGTAATAACTACATATGAGGGACAACATGATCATGAAATCCCGCCTGGAAGGACTGTCACTCATAATGCAGCTACAAATGCTCAAACAACAACCATTAATGGCAAGCCAGGAACCAATTCTGTATCAAATCCTGTTTCTACAGATACAAGAGGAAGCAGATCAAATGAGAAAGTAAATGGCAACTCAATTACTAAATCAGAGGCTGGTAAGAGTCCTGAAAGTAAATTAAATGGGCAACAACAACAAAAAAATGAAAATGCAGTTGCCAAACAGGATTCTGTTGGTGCTAACATCACATGCCAATCAAATTCTGAAGATCCATGTCGATCAAAATCAAACGAACAGCCGAAAGATGATGTAGAAACTAAATCAGAAGGAAAGAACGGATCCCCTAATCTGGTTGTTCATGATACTCCTGGTCAAGAAGGTCAACTCAAGAAGCAATCAGCATCTGATGCAGAAGCTGTCCAGAGCTAA 1515 0.4172 MEAVTVVPMVSSEETADHNVPYAIPLQRASPHSDITESQGIHGAETPSSKQKEETSIPSAVAQNKVKDSDVTASALQSDRQRSTHIAASVEKLVQSPDTPFREKRHPSQSGHDSPSIIRERVSKDGYNWRKYGQKNVKGNEFIRSYYKCTHPNCQAKKQLEQSNDGQITDSICIGQHNHPRPQSSITKPVGPVLPVLEEGPDKPRVANVEVEDKSLNEHASVPQQMKFSHSLQITNVPAADLMKAEHSQLTTANDEVHNNDYPDSKRQKIDDSNIEVSVADKSTCASRVVVQTSSEVDFVNDGYRWRKYGQKLVKGNANPRSYYRCSSPGCPVKKHVERASHDSKVVITTYEGQHDHEIPPGRTVTHNAATNAQTTTINGKPGTNSVSNPVSTDTRGSRSNEKVNGNSITKSEAGKSPESKLNGQQQQKNENAVAKQDSVGANITCQSNSEDPCRSKSNEQPKDDVETKSEGKNGSPNLVVHDTPGQEGQLKKQSASDAEAVQS* 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy7g0024 504 MobiDBLite consensus disorder prediction 456 471 - -
Ahy7g0024 504 MobiDBLite consensus disorder prediction 472 504 - -
Ahy7g0024 504 SMART WRKY_cls 300 359 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy7g0024 504 SMART WRKY_cls 123 181 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy7g0024 504 Pfam WRKY DNA -binding domain 124 180 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy7g0024 504 Pfam WRKY DNA -binding domain 301 358 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy7g0024 504 MobiDBLite consensus disorder prediction 1 119 - -
Ahy7g0024 504 PANTHER WRKY TRANSCRIPTION FACTOR 1 10 471 - -
Ahy7g0024 504 ProSiteProfiles WRKY domain profile. 118 182 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy7g0024 504 ProSiteProfiles WRKY domain profile. 295 360 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy7g0024 504 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 10 471 IPR044810 GO:0003700
Ahy7g0024 504 MobiDBLite consensus disorder prediction 375 455 - -
Ahy7g0024 504 SUPERFAMILY WRKY DNA-binding domain 119 182 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy7g0024 504 MobiDBLite consensus disorder prediction 31 90 - -
Ahy7g0024 504 Gene3D WRKY domain 287 353 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy7g0024 504 SUPERFAMILY WRKY DNA-binding domain 292 360 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy7g0024 504 MobiDBLite consensus disorder prediction 375 504 - -
Ahy7g0024 504 Gene3D WRKY domain 115 183 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy7g0024 Ahy-Chr7 142604 146524 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy7g0024 109 374 WRKY Transcription Factor Family AT2G04880 50.735 1.14e-87 275
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Ahy7g0024 WRKY 3.30E-25 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g0143 17 1555352 1560200 Ahy7g0024 7 142604 146524 hybridization