Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy3g3656 ATGATGGAGTCTTCGAAGGCTCTGCGGTTCATAACACACCAATCGTTGTTCTCGACCGTTCGATCTGGGAACCTTGATGAGCTGAAGAAGCTGGTGGAGCAGCTGAGAAAGGAAGAGTCTTGTTCTTGTGCTTCAGATGCATCATCTTCATCGATTTCTGACGTGATGTCCCTTCAGAACGATGCTGGAGAAACCGCTCTTTACATCGCCGCAGACAATAATCTGAAGGACGTGTTCAGCTTCTTGCTCAAACTCTGTGACTTCGAGATAGTGAAGATCAGTCCAAGTCTGAGATTTCAATTATGTTATGTTAACATGTTAACAGATATTGTGAGGGAGTTTTTGAGTACTTGGCCAGAGCTTTGTAAGTTATGTGACTCATCAAACACCAGCCCGCTATATGCGGCTGCTGTTCATGATCATCTGGATGTGGTCAATGCTATCTTGGATGTTGACGCCAGTTCCATGATGATAGTTAGGAAAAATGGGAAAACTTCCCTGCACAATGCTGCTAGGTATGGTATGGTTCGAATTGTGAAAGTTCTTATTGCCCGGGATCCAGCAATAGTCTCCATCAAAGATAAAAAAGGTCAAACTGCACTTCACATGGCTGTCAAAGGACAGTGTAGTGCAGTGGTGGAGGAGATATTACAAGCTGATCCAACTATACTGAACGAACGGGACAAGAAAGGCAATACAGCTCTTCACATGGCTACGAGGAAAGGCCGTGAGCAGATTGTGGCCCTTTTGCTATGCTATACCGCCATGGAAGTTAACGCCATCAATAAGCAGCAGGAAACAGCTTTGGATTTGGCAGATAAACTGCCGTATGGAGATCCGTCTTTGGTAATTAAGGAAGCACTTGCAGAGTATGGTGCCAAGCATGCCAGGAATGTCGGAAAAATAGATGAAGCCATGGAACTCAAAAGAACTGTCAGTGACATAAAACATGAGGTGCAGTCACAACTTATACAAAATGAAACTACTCGTAGACGAGTTTCTGGAATTGCCAAGGAACTGAAGAAACTTCATAGGGAAGCAGTTCAGAACACCATTAATTCTGTCACAGTCGTAGCTGTCCTTTTTGCCTCAATAGCATTCCTGGCCATATTCAATTTGCCTGGTCAGTATATAACAGGAGGATCAGATGCAGGGAAGGCCAATATTGCCAATCGTCTTGGCTTCAAAGTTTTCTGCCTTCTGAATTCTACATCTCTCTTCATCTCACTTGCAGTCGTCGTAGTTCAAATCACTTTAGTAGCATGGGACACAAGGGCTCAAAGGCAGGTTGTATCAGTGGTTAACAAGCTAATGTGGGCTGCATGTGCTTGCACATGTGGTGCTTTTCTTGCAATAGCTTTTGAGGTTGTTGGAGAACACACATGGATGGCCTTGACCATCACCATTTTGGGAGTACCAATTCTAGTTGGAACACTAGCAAGCTTGTGCTACTTTGTTTTTCGACAACATTTTGGTGTTTTCCGCAGCGATTCACAGAGGCGAATCAAGAGAGCTAGCGGAAGCAAATCTTTTTCATGGTCGTACTCTGCAAATATATCAGACTTGGACGAATATAATTCCGACATTGAAAAGATCTATGCTCTGTGA 1608 0.4384 MMESSKALRFITHQSLFSTVRSGNLDELKKLVEQLRKEESCSCASDASSSSISDVMSLQNDAGETALYIAADNNLKDVFSFLLKLCDFEIVKISPSLRFQLCYVNMLTDIVREFLSTWPELCKLCDSSNTSPLYAAAVHDHLDVVNAILDVDASSMMIVRKNGKTSLHNAARYGMVRIVKVLIARDPAIVSIKDKKGQTALHMAVKGQCSAVVEEILQADPTILNERDKKGNTALHMATRKGREQIVALLLCYTAMEVNAINKQQETALDLADKLPYGDPSLVIKEALAEYGAKHARNVGKIDEAMELKRTVSDIKHEVQSQLIQNETTRRRVSGIAKELKKLHREAVQNTINSVTVVAVLFASIAFLAIFNLPGQYITGGSDAGKANIANRLGFKVFCLLNSTSLFISLAVVVVQITLVAWDTRAQRQVVSVVNKLMWAACACTCGAFLAIAFEVVGEHTWMALTITILGVPILVGTLASLCYFVFRQHFGVFRSDSQRRIKRASGSKSFSWSYSANISDLDEYNSDIEKIYAL* 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy3g3656 535 ProSiteProfiles Ankyrin repeat region circular profile. 162 183 - -
Ahy3g3656 535 PANTHER PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 4 535 - -
Ahy3g3656 535 ProSiteProfiles Ankyrin repeat profile. 162 194 IPR002110 GO:0005515
Ahy3g3656 535 ProSiteProfiles Ankyrin repeat region circular profile. 230 251 - -
Ahy3g3656 535 SUPERFAMILY Ankyrin repeat 16 275 IPR036770 -
Ahy3g3656 535 SMART ANK_2a 162 191 IPR002110 GO:0005515
Ahy3g3656 535 SMART ANK_2a 196 225 IPR002110 GO:0005515
Ahy3g3656 535 SMART ANK_2a 128 158 IPR002110 GO:0005515
Ahy3g3656 535 SMART ANK_2a 62 92 IPR002110 GO:0005515
Ahy3g3656 535 SMART ANK_2a 230 260 IPR002110 GO:0005515
Ahy3g3656 535 Pfam Domain of unknown function 346 453 IPR026961 -
Ahy3g3656 535 Gene3D - 103 322 IPR036770 -
Ahy3g3656 535 Pfam Ankyrin repeats (3 copies) 194 260 IPR002110 GO:0005515
Ahy3g3656 535 Pfam Ankyrin repeats (3 copies) 109 185 IPR002110 GO:0005515
Ahy3g3656 535 Gene3D - 2 89 IPR036770 -
Ahy3g3656 535 ProSiteProfiles Ankyrin repeat profile. 230 263 IPR002110 GO:0005515
Ahy3g3656 535 PANTHER ANKYRIN REPEAT PLANT-LIKE PROTEIN 4 535 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy3g3656 Ahy-Chr3 135882958 135885758 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy3g3656 6 535 Miscellaneous Gene Families AT2G01680 67.537 0.0 706
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g3928 13 138690290 138692956 Ahy3g3656 3 135882958 135885758 hybridization